HHsearch alignment for GI: peg_409 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=94.51 E-value=0.054 Score=33.75 Aligned_cols=47 Identities=19% Similarity=0.208 Sum_probs=33.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6888799848889967999999999982478988956677687899999999999
Q 537021.9.peg.4 30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLE 84 (242)
Q Consensus 30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~ 84 (242)
T Consensus 100 ~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~---~v~f~~-----~~~L~~~L~~ 146 (258)
T PRK09183 100 RNENIVLLGPSGVGKTHLAIALGYEAVRAGI---KVRFTT-----AADLLLQLST 146 (258)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCC---EEEEEE-----HHHHHHHHHH
T ss_conf 5886799899998689999999999998799---399978-----9999999999