HHsearch alignment for GI: peg_409 and conserved domain: PRK10590
>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=96.20 E-value=0.0092 Score=39.18 Aligned_cols=69 Identities=28% Similarity=0.295 Sum_probs=46.2
Q ss_pred HHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHHHHHH-CC-----CCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2350948999982--76888799848889967999999999982-47-----8988956677687899999999999
Q 537021.9.peg.4 16 LISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVLRLLL-AN-----AHPSTLLCLTHTKAAAAEMSHRVLE 84 (242)
Q Consensus 16 ~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~~ll~-~g-----~~P~~IL~lTFT~kAA~El~~RI~~ 84 (242)
T Consensus 21 ~~~PTpIQ~~aIP~iL~GrDvl~~A~TGSGKTlAflLPil~~l~~~~~~~~~~~~~~aLIL~PTRELA~Qi~~~~~~ 97 (457)
T PRK10590 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRD 97 (457)
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 99999999999999977998899889811899999999999986367654456882499976879999999999997