HHsearch alignment for GI: peg_409 and conserved domain: PRK10590

>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=96.20  E-value=0.0092  Score=39.18  Aligned_cols=69  Identities=28%  Similarity=0.295  Sum_probs=46.2

Q ss_pred             HHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHHHHHH-CC-----CCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2350948999982--76888799848889967999999999982-47-----8988956677687899999999999
Q 537021.9.peg.4   16 LISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVLRLLL-AN-----AHPSTLLCLTHTKAAAAEMSHRVLE   84 (242)
Q Consensus        16 ~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~~ll~-~g-----~~P~~IL~lTFT~kAA~El~~RI~~   84 (242)
T Consensus        21 ~~~PTpIQ~~aIP~iL~GrDvl~~A~TGSGKTlAflLPil~~l~~~~~~~~~~~~~~aLIL~PTRELA~Qi~~~~~~   97 (457)
T PRK10590         21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRD   97 (457)
T ss_pred             CCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf             99999999999999977998899889811899999999999986367654456882499976879999999999997