HHsearch alignment for GI: peg_409 and conserved domain: PRK11331
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.
Probab=94.78 E-value=0.016 Score=37.46 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=30.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 6888799848889967999999999982478988956677687
Q 537021.9.peg.4 30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTK 72 (242)
Q Consensus 30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~ 72 (242)
T Consensus 193 tKknvIL~G~pGtGKT~l-Ak~lA~~l~g~~~~~rv~~Vqfhp 234 (459)
T PRK11331 193 IKKNIILQGPPGVGKTFV-ARRLAYLLTGEKAPQRVNMVQFHQ 234 (459)
T ss_pred CCCCEEEECCCCCCHHHH-HHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 588279658999887899-999999970788778468998358