HHsearch alignment for GI: peg_409 and conserved domain: PRK11331

>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.
Probab=94.78  E-value=0.016  Score=37.46  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=30.3

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             6888799848889967999999999982478988956677687
Q 537021.9.peg.4   30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTK   72 (242)
Q Consensus        30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~   72 (242)
T Consensus       193 tKknvIL~G~pGtGKT~l-Ak~lA~~l~g~~~~~rv~~Vqfhp  234 (459)
T PRK11331        193 IKKNIILQGPPGVGKTFV-ARRLAYLLTGEKAPQRVNMVQFHQ  234 (459)
T ss_pred             CCCCEEEECCCCCCHHHH-HHHHHHHHHCCCCCCCEEEEEECC
T ss_conf             588279658999887899-999999970788778468998358