HHsearch alignment for GI: peg_409 and conserved domain: PRK11776

Probab=96.80  E-value=0.0029  Score=42.69  Aligned_cols=80  Identities=18%  Similarity=0.173  Sum_probs=49.2

Q ss_pred             CCHHHH---HHHHHH------HHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             100788---888973------2350948999982--76888799848889967999999999982478988956677687
Q 537021.9.peg.4    4 HNSFQE---HSETID------LISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTK   72 (242)
Q Consensus         4 ~~~~~~---~~~~~~------~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~   72 (242)
T Consensus         3 ~~sF~~l~L~~~ll~aL~~~G~~~pTpIQ~~aIP~il~G~Dvi~~A~TGSGKTlAfllPil~~l~~~~~~~qaLIL~PTR   82 (459)
T PRK11776          3 MTAFSTLPLPPALLANLDELGYTEMTPIQAQSLPAILAGKDVIAQAKTGSGKTAAFGLGLLQKLDVKRFRVQALVLCPTR   82 (459)
T ss_pred             CCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHH
T ss_conf             68863489799999999977999999899999999977998899889985899999999998411367898599996759


Q ss_pred             HHHHHHHHHHH
Q ss_conf             89999999999
Q 537021.9.peg.4   73 AAAAEMSHRVL   83 (242)
Q Consensus        73 kAA~El~~RI~   83 (242)
T Consensus        83 ELa~QV~~~~~   93 (459)
T PRK11776         83 ELADQVAKEIR   93 (459)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999