HHsearch alignment for GI: peg_409 and conserved domain: PRK12727

>PRK12727 flagellar biosynthesis regulator FlhF; Provisional.
Probab=90.33  E-value=0.12  Score=31.22  Aligned_cols=47  Identities=13%  Similarity=0.175  Sum_probs=28.9

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHH-HCCCCHHHHHHH---HHHHHHHHHHH
Q ss_conf             88879984888996799999999998-247898895667---76878999999
Q 537021.9.peg.4   31 TRSAWVSANAGSGKTHILVQRVLRLL-LANAHPSTLLCL---THTKAAAAEMS   79 (242)
Q Consensus        31 ~~~~lV~A~aGSGKT~tL~~rv~~ll-~~g~~P~~IL~l---TFT~kAA~El~   79 (242)
T Consensus       348 gGv~AlvGpTGvGKTTT~aKlAa~~~~~~g~~--~valit~DtyRiga~eQL~  398 (557)
T PRK12727        348 GGVIALVGPTGAGKTTTIAKLAQRFAAQHAPR--DVALVTTDTQRVGGREQLH  398 (557)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC--EEEEEECCCCCHHHHHHHH
T ss_conf             76478743777673117999999999973998--1899972664087999999