HHsearch alignment for GI: peg_409 and conserved domain: PRK13909
>PRK13909 putative recombination protein RecB; Provisional.
Probab=99.96 E-value=1.3e-28 Score=220.98 Aligned_cols=127 Identities=31% Similarity=0.460 Sum_probs=102.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHH
Q ss_conf 79984888996799999999998247898895667768789999999999996775216742214649973147999789
Q 537021.9.peg.4 34 AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIITAWSHLSDEILSAEITKIQGKKPNKSD 113 (242)
Q Consensus 34 ~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 113 (242)
T Consensus 1 l~i~AsAGSGKT~~L~~R~l~Ll~~g~~p~~ILavTFT~kAA~EMk~RI~~~L~~l~~~~~~~~~~~~~~~~~~~-~~~~ 79 (911)
T PRK13909 1 LALKASAGSGKTFALSVRFLALLFKGANPNEILALTFTKKAANEMKERIIDTLLNLEKENKESELNELEEELGLS-KEEL 79 (911)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-HHHH
T ss_conf 979976704499999999999973897924487855688999999999999998663054305899999870899-8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 99999999999831001321117999987555428975889998516837
Q 537021.9.peg.4 114 MSKARHLLITILETPGGLKVQTIHAFCEAIMQQFPLEANITSHFAIADEE 163 (242)
Q Consensus 114 ~~~~~~ll~~~l~~~~~~~i~Ti~~f~~~ilr~~~~~~gl~~~f~i~d~~ 163 (242)
T Consensus 80 ~~~~~~~~~~~l~--~~~~I~TIhsFc~~ilr~~~~~~gl~~~f~i~~~~ 127 (911)
T PRK13909 80 LNKRDKVYERFLN--SELKISTIDAFFQKILRKFCLNLGLSPDFEVTSSH 127 (911)
T ss_pred HHHHHHHHHHHHC--CCCEEEEHHHHHHHHHHHHHHHHCCCCCCEECCCH
T ss_conf 9999999997514--79869769999999999789982969997557118