HHsearch alignment for GI: peg_409 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=95.52 E-value=0.011 Score=38.74 Aligned_cols=32 Identities=34% Similarity=0.431 Sum_probs=24.4
Q ss_pred HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99982768887998488899679999999999
Q 537021.9.peg.4 24 QLLASDPTRSAWVSANAGSGKTHILVQRVLRL 55 (242)
Q Consensus 24 q~~a~~~~~~~lV~A~aGSGKT~tL~~rv~~l 55 (242)
T Consensus 238 ~~li~rpHGIiLVTGPTGSGKtTTLYaaL~~L 269 (495)
T TIGR02533 238 ERLIKRPHGIILVTGPTGSGKTTTLYAALSRL 269 (495)
T ss_pred HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99971889618841778985258899999863