HHsearch alignment for GI: peg_409 and conserved domain: TIGR02746
>TIGR02746 TraC-F-type type-IV secretion system protein TraC; InterPro: IPR014117 The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases..
Probab=91.55 E-value=0.22 Score=29.54 Aligned_cols=142 Identities=15% Similarity=0.143 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH--HH
Q ss_conf 688879984888996799999999998247898895667----768789999999999996775216742214649--97
Q 537021.9.peg.4 30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCL----THTKAAAAEMSHRVLEIITAWSHLSDEILSAEI--TK 103 (242)
Q Consensus 30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~l----TFT~kAA~El~~RI~~~l~~~~~~~~~~~~~~l--~~ 103 (242)
T Consensus 488 ~NYN~~~~g~sG~GKSf~~Q~~~~~~L~~G---~kv~viDvG~Sy~K---------LC~~lgG-------~Yie~~~e~~ 548 (900)
T TIGR02746 488 TNYNIAVVGGSGAGKSFFMQELIVSVLSRG---GKVWVIDVGRSYKK---------LCEMLGG-------TYIEFSPEST 548 (900)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCC---CEEEEEEECCCHHH---------HHHHHCC-------CEECCCCCCC
T ss_conf 771489972889871687989999985179---84899960788488---------8765187-------1210466776
Q ss_pred HHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHCCCCCCCCCCCCHHHH------HHHHHH
Q ss_conf 3147999-789999999999998310013211179----99987555428975889998516837899------999999
Q 537021.9.peg.4 104 IQGKKPN-KSDMSKARHLLITILETPGGLKVQTIH----AFCEAIMQQFPLEANITSHFAIADEEQSK------KLIEEA 172 (242)
Q Consensus 104 ~~~~~~~-~~~~~~~~~ll~~~l~~~~~~~i~Ti~----~f~~~ilr~~~~~~gl~~~f~i~d~~~~~------~l~~~~ 172 (242)
T Consensus 549 i~LNPFTHL~-i~~A~~----~~~~~~~~~v~~i~Geqv~~~~~i~~~ia~MAGlDl~P~~~l~~~q~lmaryCs~l~~A 623 (900)
T TIGR02746 549 ICLNPFTHLD-IEEARF----DIIDFDGNNVTEIDGEQVDEIDQITALIALMAGLDLSPEGGLSDEQELMARYCSLLEEA 623 (900)
T ss_pred CCCCCCCCCC-CCCCCC----CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 3238744466-000333----22673634677567402889999999999884466684556788889999999999999
Q ss_pred HHHHHHHHHCCC-HHHHHHHHHHH
Q ss_conf 999999843278-03599999999
Q 537021.9.peg.4 173 KKSTLASIMLDN-NEELKKAFYEI 195 (242)
Q Consensus 173 ~~~~~~~~~~~~-~~~~~~~l~~~ 195 (242)
T Consensus 624 I~~~W~~~g~~a~~tdV~~~L~~~ 647 (900)
T TIGR02746 624 ILAAWKEKGNEATITDVADALEQL 647 (900)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf 999999712248848999999852