HHsearch alignment for GI: peg_409 and conserved domain: TIGR02746

>TIGR02746 TraC-F-type type-IV secretion system protein TraC; InterPro: IPR014117 The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases..
Probab=91.55  E-value=0.22  Score=29.54  Aligned_cols=142  Identities=15%  Similarity=0.143  Sum_probs=67.1

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH--HH
Q ss_conf             688879984888996799999999998247898895667----768789999999999996775216742214649--97
Q 537021.9.peg.4   30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCL----THTKAAAAEMSHRVLEIITAWSHLSDEILSAEI--TK  103 (242)
Q Consensus        30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~l----TFT~kAA~El~~RI~~~l~~~~~~~~~~~~~~l--~~  103 (242)
T Consensus       488 ~NYN~~~~g~sG~GKSf~~Q~~~~~~L~~G---~kv~viDvG~Sy~K---------LC~~lgG-------~Yie~~~e~~  548 (900)
T TIGR02746       488 TNYNIAVVGGSGAGKSFFMQELIVSVLSRG---GKVWVIDVGRSYKK---------LCEMLGG-------TYIEFSPEST  548 (900)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCC---CEEEEEEECCCHHH---------HHHHHCC-------CEECCCCCCC
T ss_conf             771489972889871687989999985179---84899960788488---------8765187-------1210466776


Q ss_pred             HHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHCCCCCCCCCCCCHHHH------HHHHHH
Q ss_conf             3147999-789999999999998310013211179----99987555428975889998516837899------999999
Q 537021.9.peg.4  104 IQGKKPN-KSDMSKARHLLITILETPGGLKVQTIH----AFCEAIMQQFPLEANITSHFAIADEEQSK------KLIEEA  172 (242)
Q Consensus       104 ~~~~~~~-~~~~~~~~~ll~~~l~~~~~~~i~Ti~----~f~~~ilr~~~~~~gl~~~f~i~d~~~~~------~l~~~~  172 (242)
T Consensus       549 i~LNPFTHL~-i~~A~~----~~~~~~~~~v~~i~Geqv~~~~~i~~~ia~MAGlDl~P~~~l~~~q~lmaryCs~l~~A  623 (900)
T TIGR02746       549 ICLNPFTHLD-IEEARF----DIIDFDGNNVTEIDGEQVDEIDQITALIALMAGLDLSPEGGLSDEQELMARYCSLLEEA  623 (900)
T ss_pred             CCCCCCCCCC-CCCCCC----CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             3238744466-000333----22673634677567402889999999999884466684556788889999999999999


Q ss_pred             HHHHHHHHHCCC-HHHHHHHHHHH
Q ss_conf             999999843278-03599999999
Q 537021.9.peg.4  173 KKSTLASIMLDN-NEELKKAFYEI  195 (242)
Q Consensus       173 ~~~~~~~~~~~~-~~~~~~~l~~~  195 (242)
T Consensus       624 I~~~W~~~g~~a~~tdV~~~L~~~  647 (900)
T TIGR02746       624 ILAAWKEKGNEATITDVADALEQL  647 (900)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf             999999712248848999999852