HHsearch alignment for GI: peg_409 and conserved domain: TIGR02881
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=93.55 E-value=0.027 Score=35.92 Aligned_cols=192 Identities=13% Similarity=0.135 Sum_probs=77.9
Q ss_pred HHHHCCCHHHHHHHC-----C-CCCEEEEECCCCCHHHHHHHHHHHHHHC-CCCH-------HH-HHHHHHHHHHHHHHH
Q ss_conf 323509489999827-----6-8887998488899679999999999824-7898-------89-566776878999999
Q 537021.9.peg.4 15 DLISQTKSEQLLASD-----P-TRSAWVSANAGSGKTHILVQRVLRLLLA-NAHP-------ST-LLCLTHTKAAAAEMS 79 (242)
Q Consensus 15 ~~~~~~~~qq~~a~~-----~-~~~~lV~A~aGSGKT~tL~~rv~~ll~~-g~~P-------~~-IL~lTFT~kAA~El~ 79 (242)
T Consensus 20 EiYA~i~i~~kR~~~GLk~~~~~LHMiFKGNPGTGKTTVA-R~~gklf~emnvL~KGH~iE~ERADLVGEYIGHTAqkTR 98 (261)
T TIGR02881 20 EIYAWIQINEKRKEEGLKTSKQVLHMIFKGNPGTGKTTVA-RLLGKLFKEMNVLSKGHLIEVERADLVGEYIGHTAQKTR 98 (261)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH-HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf 9999999988887510114884478774278668438999-999999853375678867887622212232030048999
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999967752167422146499731479997899999999999983100132111799998755542897588999851
Q 537021.9.peg.4 80 HRVLEIITAWSHLSDEILSAEITKIQGKKPNKSDMSKARHLLITILETPGGLKVQTIHAFCEAIMQQFPLEANITSHFAI 159 (242)
Q Consensus 80 ~RI~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ll~~~l~~~~~~~i~Ti~~f~~~ilr~~~~~~gl~~~f~i 159 (242)
T Consensus 99 e~~kkA~GGv-------LFiDEAYSLaRGGEKDFGKEAIDtLVK~mEd~~~~lvlILAGY~~EM~yFL~~NPGL~SRFPi 171 (261)
T TIGR02881 99 EVIKKALGGV-------LFIDEAYSLARGGEKDFGKEAIDTLVKAMEDQRNELVLILAGYSDEMDYFLSLNPGLRSRFPI 171 (261)
T ss_pred HHHHHHCCCC-------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999863880-------055777776148888766208889999876156986899708768999986207797776650
Q ss_pred CC---CHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHH----CCH-HHHHHHHHHHHHH
Q ss_conf 68---3789999999999999984327---803599999999941----696-7799999999984
Q 537021.9.peg.4 160 AD---EEQSKKLIEEAKKSTLASIMLD---NNEELKKAFYEILEI----SND-EDIETLISDIISN 214 (242)
Q Consensus 160 ~d---~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~-~~~~~~l~~~l~~ 214 (242)
T Consensus 172 ~i~FPdY~~eeL~~Ia~~m~~~ReY~Lt~~A~~~lr~~l~~~~~~~~~~~sNaR~vRN~iE~AIR~ 237 (261)
T TIGR02881 172 SIDFPDYTVEELMEIAERMVKEREYKLTEEAKWKLREHLAKVDQLSSREFSNARYVRNIIEKAIRR 237 (261)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 541889988899999999986464225788999999997412444210057620124288999999