HHsearch alignment for GI: peg_409 and conserved domain: cd00046
>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=97.31 E-value=0.00028 Score=49.84 Aligned_cols=114 Identities=19% Similarity=0.149 Sum_probs=67.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCH
Q ss_conf 88799848889967999999999982478988956677687899999999999967752167422146499731479997
Q 537021.9.peg.4 32 RSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIITAWSHLSDEILSAEITKIQGKKPNK 111 (242)
Q Consensus 32 ~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 111 (242)
T Consensus 1 ~~~lv~~ptGsGKT~~~~~~~~~~~~~~-~~~~~lil~Pt~~L~~q~~~~~~~~~~~~~~---~~~-------~~~~~~~ 69 (144)
T cd00046 1 RDVLLAAPTGSGKTLAALLPILELLDSL-KGGQVLVLAPTRELANQVAERLKELFGEGIK---VGY-------LIGGTSI 69 (144)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHHHCCCCCE---EEE-------EECCCCH
T ss_conf 9999988997179999999999999756-8976999746799999999999997488717---999-------9613636
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
Q ss_conf 899999999999983100132111799998755542897588999851683789
Q 537021.9.peg.4 112 SDMSKARHLLITILETPGGLKVQTIHAFCEAIMQQFPLEANITSHFAIADEEQS 165 (242)
Q Consensus 112 ~~~~~~~~ll~~~l~~~~~~~i~Ti~~f~~~ilr~~~~~~gl~~~f~i~d~~~~ 165 (242)
T Consensus 70 ~~-------~~~~~~~~~~ilv~T~~~l~~~~~~~~~~~--~~~~~vViDEaH~ 114 (144)
T cd00046 70 KQ-------QEKLLSGKTDIVVGTPGRLLDELERLKLSL--KKLDLLILDEAHR 114 (144)
T ss_pred HH-------HHHHHCCCCCEEECCHHHHHHHHHCCCCCC--CCCCEEEEECHHH
T ss_conf 77-------898745898499828899999997387655--5100999988887