HHsearch alignment for GI: peg_409 and conserved domain: pfam00006

>pfam00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain. This family includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.

Probab=90.88  E-value=0.3  Score=28.56  Aligned_cols=52  Identities=15%  Similarity=0.131  Sum_probs=33.1

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             888799848889967999999999982478988956677687899999999999
Q 537021.9.peg.4   31 TRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLE   84 (242)
Q Consensus        31 ~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~   84 (242)
T Consensus        15 GQr~~I~g~~g~GKt~l~~~i~~~~~~~~~~--V~~~iGer~~ev~~~~~~~~~   66 (213)
T pfam00006        15 GQRIGIFGGSGTGKTVLLGMIARNAKADVVE--VYVLIGERGREVAEFIEELLG   66 (213)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCE--EEEECCCCHHHHHHHHHHHHC
T ss_conf             8887787899998899999999856618935--998137777999999997521