HHsearch alignment for GI: peg_409 and conserved domain: pfam00448

>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.

Probab=95.84  E-value=0.0067  Score=40.14  Aligned_cols=51  Identities=24%  Similarity=0.244  Sum_probs=33.9

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH--HHHHHHHHHHHHHHH
Q ss_conf             879984888996799999999998247898895667768--789999999999996
Q 537021.9.peg.4   33 SAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHT--KAAAAEMSHRVLEII   86 (242)
Q Consensus        33 ~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT--~kAA~El~~RI~~~l   86 (242)
T Consensus         3 vi~lvGptGvGKTTTiaKLAa~~~~~~~---~V~lit~Dt~R~gA~eQL~~ya~~l   55 (196)
T pfam00448         3 VILLVGLQGSGKTTTIAKLAAYLKKQGK---KVLLVAADTFRAAAIEQLKQLAERL   55 (196)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf             9999899999889999999999997799---2899975877688999999999863