RPSBLAST alignment for GI: peg_409 and conserved domain: TIGR02784
>gnl|CDD|163018 TIGR02784, addA_alphas, double-strand break repair helicase AddA, alphaproteobacterial type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the alphaproteobacteria (as modeled here) and the Firmicutes, while the partner AddB proteins show no strong homology across the two groups of species. Length = 1141
Score = 229 bits (586), Expect = 5e-61
Identities = 94/196 (47%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Query: 23 EQLLASDPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRV 82
Q ASDP SAWVSANAGSGKTH+L QRV+RLLL PS +LCLT+TKAAAAEM +RV
Sbjct: 2 RQARASDPKTSAWVSANAGSGKTHVLTQRVIRLLLNGVPPSKILCLTYTKAAAAEMQNRV 61
Query: 83 LEIITAWSHLSDEILSAEITKIQGKKPNKSDMSKARHLLITILETPGGLKVQTIHAFCEA 142
+ + W+ L D L A + ++GK+P+ + +++AR L LETPGGLK+QTIHAFCE+
Sbjct: 62 FDRLGEWAVLDDAELRARLEALEGKRPDAAKLAEARRLFARALETPGGLKIQTIHAFCES 121
Query: 143 IMQQFPLEANITSHFAIADEEQSKKLIEEAKKSTLASIMLDNNEELKKAFYEILEISNDE 202
++ QFPLEAN+ HF++ D+ + L+ EA+++ LA + ++ L A +LE + +
Sbjct: 122 LLHQFPLEANVAGHFSVMDDRAAATLLAEARRALLAHVAAA-DDALADALATVLEAAGET 180
Query: 203 DIETLISDIISNRTAL 218
E L+++I++ R L
Sbjct: 181 GFEALLAEIVARRAHL 196