HHsearch alignment for GI: peg_410 and conserved domain: COG2887

>COG2887 RecB family exonuclease [DNA replication, recombination, and repair].
Probab=98.97  E-value=5.8e-09  Score=81.42  Aligned_cols=171  Identities=14%  Similarity=0.097  Sum_probs=85.0

Q ss_pred             HHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCH--HHH--HHHHHH-HHHHH--CCCCCHHHHHHHHHHHH
Q ss_conf             1110010015554446630155677999999985668--996--568--999999-98500--45899889999999999
Q 537021.9.peg.4  759 PSTIDTKGKTNLESLLSDNQTFNRGLIIHKLLQVIFT--LPE--HKR--KNFITS-YCTKN--AKLWPAKEYKNLLLSIT  829 (952)
Q Consensus       759 ~s~~~~~~~~~~~~~~~~~~a~~~Gt~vH~~lE~l~~--~~~--~~~--~~~~~~-~l~~~--~~~~~~~~~~~~~~~~~  829 (952)
T Consensus        16 ~~a~~i~~l~~~~~~~e~~~~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~   95 (269)
T COG2887          16 FYARRILALPPLGTRAEEPEAAVRGTLLHAILEALVGERYHAAAAALAKLAWLLRKELAEAELPGYTDAEWLDRLRARAR   95 (269)
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf             99998635377875100244243354799999988631244320316777655555443102333466203488998665


Q ss_pred             HHHCCHHHHHHHCCC--CCCCEE-EEEEEECCCCCEEEEEEEEEEEEECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             986296557871777--856113-78886238885899979778999799-89999725801389998999998899999
Q 537021.9.peg.4  830 RLLENPMMTTAMSCD--SYSEVS-VSGKINCPKKDIIISGRIDQISISQQ-NIFIFEYKTHHHVPQEIEHIPYTHIAQLS  905 (952)
Q Consensus       830 ~~l~~~~~~~~~~~~--~~~Ev~-~e~~~~~~~~~~~i~G~IDri~~~~~-~~~IiDyKT~~~~~~~~~~~~~~Y~~QL~  905 (952)
T Consensus        96 ~~~~~~~e~~r~~~~~~~~~e~~~~~--~~i~~~-i~l~G~aDRid~~~~g~i~ilDYKTG~~p~~a--~~~~~~~~ql~  170 (269)
T COG2887          96 AFLVYDWERERGTAFHAWLEEERGAE--LLIDGG-IRLRGRADRIDKDADGELEILDYKTGKSPSAA--RAPAAVSPQLA  170 (269)
T ss_pred             HHHHHHHHHHCCCCEEEEEEEECCEE--EEECCC-CEECCEEEECCCCCCCCEEEEEEECCCCCCHH--HCHHCCCHHHH
T ss_conf             45345687616773336655522304--673034-02211430002478884689986348886243--32111053468


Q ss_pred             HHHHHHHHHC--CCCCEEEEEEECCCCEEEE
Q ss_conf             9999999967--9982789999855987898
Q 537021.9.peg.4  906 IYEKILKDSY--PNKSLVCLLIYVSEPKVFI  934 (952)
Q Consensus       906 ~Y~~al~~~~--p~~~V~~~l~y~~~~~~~~  934 (952)
T Consensus       171 ~~~~~l~~~~~~~~~p~~l~~v~~~~~~~~~  201 (269)
T COG2887         171 LEALALIEGRFRGVEPGQLRLVYLRKSGRVG  201 (269)
T ss_pred             HHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
T ss_conf             8899887145566678872488865777667