HHsearch alignment for GI: peg_410 and conserved domain: COG2887
>COG2887 RecB family exonuclease [DNA replication, recombination, and repair].
Probab=98.97 E-value=5.8e-09 Score=81.42 Aligned_cols=171 Identities=14% Similarity=0.097 Sum_probs=85.0
Q ss_pred HHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCH--HHH--HHHHHH-HHHHH--CCCCCHHHHHHHHHHHH
Q ss_conf 1110010015554446630155677999999985668--996--568--999999-98500--45899889999999999
Q 537021.9.peg.4 759 PSTIDTKGKTNLESLLSDNQTFNRGLIIHKLLQVIFT--LPE--HKR--KNFITS-YCTKN--AKLWPAKEYKNLLLSIT 829 (952)
Q Consensus 759 ~s~~~~~~~~~~~~~~~~~~a~~~Gt~vH~~lE~l~~--~~~--~~~--~~~~~~-~l~~~--~~~~~~~~~~~~~~~~~ 829 (952)
T Consensus 16 ~~a~~i~~l~~~~~~~e~~~~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~ 95 (269)
T COG2887 16 FYARRILALPPLGTRAEEPEAAVRGTLLHAILEALVGERYHAAAAALAKLAWLLRKELAEAELPGYTDAEWLDRLRARAR 95 (269)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 99998635377875100244243354799999988631244320316777655555443102333466203488998665
Q ss_pred HHHCCHHHHHHHCCC--CCCCEE-EEEEEECCCCCEEEEEEEEEEEEECC-EEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 986296557871777--856113-78886238885899979778999799-89999725801389998999998899999
Q 537021.9.peg.4 830 RLLENPMMTTAMSCD--SYSEVS-VSGKINCPKKDIIISGRIDQISISQQ-NIFIFEYKTHHHVPQEIEHIPYTHIAQLS 905 (952)
Q Consensus 830 ~~l~~~~~~~~~~~~--~~~Ev~-~e~~~~~~~~~~~i~G~IDri~~~~~-~~~IiDyKT~~~~~~~~~~~~~~Y~~QL~ 905 (952)
T Consensus 96 ~~~~~~~e~~r~~~~~~~~~e~~~~~--~~i~~~-i~l~G~aDRid~~~~g~i~ilDYKTG~~p~~a--~~~~~~~~ql~ 170 (269)
T COG2887 96 AFLVYDWERERGTAFHAWLEEERGAE--LLIDGG-IRLRGRADRIDKDADGELEILDYKTGKSPSAA--RAPAAVSPQLA 170 (269)
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCEE--EEECCC-CEECCEEEECCCCCCCCEEEEEEECCCCCCHH--HCHHCCCHHHH
T ss_conf 45345687616773336655522304--673034-02211430002478884689986348886243--32111053468
Q ss_pred HHHHHHHHHC--CCCCEEEEEEECCCCEEEE
Q ss_conf 9999999967--9982789999855987898
Q 537021.9.peg.4 906 IYEKILKDSY--PNKSLVCLLIYVSEPKVFI 934 (952)
Q Consensus 906 ~Y~~al~~~~--p~~~V~~~l~y~~~~~~~~ 934 (952)
T Consensus 171 ~~~~~l~~~~~~~~~p~~l~~v~~~~~~~~~ 201 (269)
T COG2887 171 LEALALIEGRFRGVEPGQLRLVYLRKSGRVG 201 (269)
T ss_pred HHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 8899887145566678872488865777667