HHsearch alignment for GI: peg_410 and conserved domain: COG3893

>COG3893 Inactivated superfamily I helicase [DNA replication, recombination, and repair].
Probab=98.17  E-value=0.00074  Score=44.43  Aligned_cols=306  Identities=15%  Similarity=0.195  Sum_probs=146.6

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHH
Q ss_conf             99999999999983586221254368782446898615310122489999987416973660486211233105226876
Q 537021.9.peg.4  345 LARRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMAL  424 (952)
Q Consensus       345 ~a~~i~~~I~~l~~~~~~~~~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~~ip~~~~~~~~~~~~~~v~~l~a~  424 (952)
T Consensus       317 ea~aiA~alr~aLe~~-------------~~aALVt~Dr~lARRV----~~~L~R~gv~adds~G~pLs~t~~aal~~~~  379 (697)
T COG3893         317 EAYAIALALREALEAP-------------RTAALVTPDRNLARRV----ATELARFGVEADDSAGTPLSATPQAALLMLL  379 (697)
T ss_pred             HHHHHHHHHHHHHHCC-------------CCCCCCCCCHHHHHHH----HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             6799999999998483-------------3000016743789999----9999870877665568754322777999999


Q ss_pred             HHHHHCCCCCHHHHHHCCCCCCCC--CHH------HHHHHHHHCCCCCCH-H----HHHHHH----HHH-HHHHH-----
Q ss_conf             888748131102454305877478--888------999987301268657-8----887643----111-15899-----
Q 537021.9.peg.4  425 GRFILSQEDDLSFVCMLKSPLFNF--SED------DIFKICTQRHETETV-Y----EYIQKF----ANC-GISKF-----  481 (952)
Q Consensus       425 l~~l~~p~~~~~~~~~L~spl~g~--~~~------~l~~l~~~~~~~~~~-~----~~~~~~----~~~-~~~~~-----  481 (952)
T Consensus       380 ie~v~rpgDPv~Ll~llKhPl~~fg~e~~~~~~aa~~LEl~alrg~~~s~~~~~L~~lle~rl~~~~d~~~~p~~~~~~~  459 (697)
T COG3893         380 IEAVLRPGDPVALLALLKHPLARFGLEFLDLRDAANVLELAALRGGKVSPGYGELPALLEARLLGTSDDDLPPAWRAGLD  459 (697)
T ss_pred             HHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
T ss_conf             99980799769899997094120477123210757778899860788883166799999998512466667852020369


Q ss_pred             ---HHHHHHHHHHHHHH-------HCCCHHHHHHHHHHHCCHHHHH--------HHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             ---99999999999864-------2199899999998503469999--------81135238999999999999985205
Q 537021.9.peg.4  482 ---QHVIKYIHELIHIA-------QFCSPHDFFTLILGAKKGRQQF--------ISRFGNEVIDVLDEFLNFTLRNEQNS  543 (952)
Q Consensus       482 ---~~~~~~l~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~l~~l~~~a~~~e~~~  543 (952)
T Consensus       460 ~~~i~lA~~L~~~i~~A~~pl~~~~~~~~~~l~~~a~~t~~ale~l~~dd~g~l~~lw~~eage~L~~l~~gl~--~~~a  537 (697)
T COG3893         460 PDNIALARLLLQRISEAKAPLGAGHFEAIADLLALALDTVRALENLAIDDEGYLLALWLGEAGEKLAALLRGLI--EAGA  537 (697)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCC
T ss_conf             42479999999998864356323227777639999999999998625662103999987505579999999998--6146


Q ss_pred             CCCHHHHHHHHHHCCCCCCCC-CCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             689899999885010013211-2357885303001221456777799815887767765444222344555666631235
Q 537021.9.peg.4  544 YSSLQELISELEQYPPTIKRA-HSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWI  622 (952)
Q Consensus       544 ~~~l~~f~~~l~~~~~~~~~~-~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  622 (952)
T Consensus       538 ~ls~~ew~diLd~L~~ge~vkp~~~~hprv~I~gaLEaRl~~~D~VVi~glNEg~wP~~~~nd~FlSr~mr~~lgL~p--  615 (697)
T COG3893         538 QLSAPEWPDILDALVAGETVKPAPGTHPRVRIMGALEARLQRFDGVVIVGLNEGVWPSKTPNDLFLSRPMRKSLGLPP--  615 (697)
T ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCHHHHHHCCCCC--
T ss_conf             567305789999861776236788888716883104665600352899557756488999651233458897459989--


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf             44457874779999999764444678878751146652899983167777666543210688731035
Q 537021.9.peg.4  623 PQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEKKSNQRTWYDMVYDSFH  690 (952)
Q Consensus       623 ~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~  690 (952)
T Consensus       616 -------p-erR~glq----------Ahd~fqma~na~eVvLt~~~r~g-~ap~v~SrwLeRL~~l~~  664 (697)
T COG3893         616 -------P-ERRIGLQ----------AHDYFQMAKNAPEVVLTRSERSG-EAPAVSSRWLERLLTLLG  664 (697)
T ss_pred             -------H-HHHHHHH----------HHHHHHHHCCCCCEEEEEHHCCC-CCCCHHHHHHHHHHHHHH
T ss_conf             -------6-7875466----------64899996599817986320158-986045689999999850