HHsearch alignment for GI: peg_410 and conserved domain: PRK11054

>PRK11054 helD DNA helicase IV; Provisional.
Probab=100.00  E-value=0  Score=416.57  Aligned_cols=136  Identities=28%  Similarity=0.355  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHCC
Q ss_conf             99999999999999999986997758999999998315842489999986179899980710199999999999841002
Q 537021.9.peg.4  125 ASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFF  204 (952)
Q Consensus       125 ~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~~~~~  204 (952)
T Consensus       387 ~~l~l~~ply~aYe~~Lk~~~~IDFdDmI~~a~~ll~~~--------~~~~~~ryILVDEfQDiS~~Q~~Ll~aL~~~--  456 (684)
T PRK11054        387 KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAVVILEKG--------RFISPWKHILVDEFQDISPQRAALLEALRKQ--  456 (684)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC--------CHHHCCCEEEEECCCCCCHHHHHHHHHHHHC--
T ss_conf             778999999999999998759988799999999998707--------1442376899876336999999999998733--


Q ss_pred             CCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             46766676864999966656765424888478999999966521345765312006866688789999999997112100
Q 537021.9.peg.4  205 VGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENA  284 (952)
Q Consensus       205 ~~~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~~~N~~f~~~~~~  284 (952)
T Consensus       457 ------~~~~~LfaVGDD~QSIYrFrGAdi~~~~~F~~~F~~--------a~~~~L~~nYRs~~~I~~~An~fI~~Np~Q  522 (684)
T PRK11054        457 ------NSQTTLFAVGDDWQAIYRFSGADVSLTTAFHERFGE--------GTICHLDTTYRFNSRIGEVANRFIQQNPHQ  522 (684)
T ss_pred             ------CCCCEEEEEECCCHHEEEECCCCHHHHHHHHHHCCC--------CEEEECCCCCCCCHHHHHHHHHHHHHCHHH
T ss_conf             ------999759998067421011268884899989876799--------679978788888659999999999849574