>TIGR03623 probable DNA repair protein. Members of this protein family are bacterial proteins of about 900 amino acids in length. Members show extended homology to proteins in TIGR02786, the AddB protein of double-strand break repair via homologous recombination. Members of this family, therefore, may be DNA repair proteins.

Probab=99.97 E-value=2.5e-24 Score=192.73 Aligned_cols=595 Identities=12% Similarity=0.135 Sum_probs=291.2 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHCCCC Q ss_conf 99999999999999998699775899999999831584248999998617989998071019999999999984100246 Q 537021.9.peg.4 127 LTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVG 206 (952) Q Consensus 127 ~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~~~~~~~ 206 (952) T Consensus 121 ~~~Fl~W~~~f~~~~~~~~~i~~~~l~~~l~~~~~~~~~---------~~p~~i~l~GFd~l~P~~~~Ll~~L~~----- 186 (874) T TIGR03623 121 TRLFLDWRTAFEARCRKEGWIDAAQLPEQLLDLLRQGGL---------KLPKQIILAGFDELTPQQQALLAALEE----- 186 (874) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC---------CCCCEEEEEECCCCCHHHHHHHHHHHH----- T ss_conf 899999999999999877985777899999999855788---------998728999679799899999999996----- Q ss_pred CCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC-CCHHHHHHHHHHHHCCCCCC Q ss_conf 76667686499996665676542488847899999996652134576531200686668-87899999999971121001 Q 537021.9.peg.4 207 KNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFR-STADILTVVDKVFSIPENAQ 285 (952) Q Consensus 207 ~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~R-S~~~Ii~~~N~~f~~~~~~~ 285 (952) T Consensus 187 -----~g~~v~~~~~~~~~-----~~~~~---------------------~~----~~~d~e~Ei~aaA~Wa-------- 223 (874) T TIGR03623 187 -----RGVDVQQWLPESEE-----QASPQ---------------------RL----ACADPEDEIRAAARWA-------- 223 (874) T ss_pred -----CCCEEEEECCCCCC-----CCCCC---------------------EE----CCCCHHHHHHHHHHHH-------- T ss_conf -----49757973665356-----67552---------------------21----3699799999999999-------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 23322122212233447888743651134443223343101111100011133336888999999999999835862212 Q 537021.9.peg.4 286 GLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSN 365 (952) Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~I~~l~~~~~~~~~ 365 (952) T Consensus 224 --------------------------------------------------------------------~~~l~~~----- 230 (874) T TIGR03623 224 --------------------------------------------------------------------RQQLEQN----- 230 (874) T ss_pred --------------------------------------------------------------------HHHHHCC----- T ss_conf --------------------------------------------------------------------9986228----- Q ss_pred CCCCCCCCCCEEEEEECCCCH-HHHHHHHHHHH---------HHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCH Q ss_conf 543687824468986153101-22489999987---------41697366048621123310522687688874813110 Q 537021.9.peg.4 366 GKKRVIQAKDILVLVRKRKDT-PLITFLTRFLK---------NDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDL 435 (952) Q Consensus 366 ~~~r~~~~~diaVL~r~~~~~-~~~~~~l~al~---------~~~~ip~~~~~~~~~~~~~~v~~l~a~l~~l~~p~~~~ 435 (952) T Consensus 231 ------p~~rigIVvp~L~~~r~~L~~~l~~~l~P~~~~~~~~~~~~~~NiSlG~pL~~~Pli~~AL~lL~l~~~~~~~~ 304 (874) T TIGR03623 231 ------PAARIGVVVPNLEELRSQLARILDDVLHPQALLPTSADAPRPFNISLGRPLAEEPLVHTALLLLELAQGKLEPE 304 (874) T ss_pred ------CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHH T ss_conf ------88638997787798999999999987282002776544566402237886421789999999998503787899 Q ss_pred HHHHHCCCCCCCCCHHHHH-------HHHHHCCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHC--CCHH- Q ss_conf 2454305877478888999-------9873012686578887643111----158999999999999986421--9989- Q 537021.9.peg.4 436 SFVCMLKSPLFNFSEDDIF-------KICTQRHETETVYEYIQKFANC----GISKFQHVIKYIHELIHIAQF--CSPH- 501 (952) Q Consensus 436 ~~~~~L~spl~g~~~~~l~-------~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~--~~~~- 501 (952) T Consensus 305 ~~~~lL~SPy~~~~~~e~~~ra~ld~~lr~~~~~~~~l~~ll~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~s~ 384 (874) T TIGR03623 305 EASALLRSPYIAGAEVEALARAQLDARLRRLAEASVTLAQLLKRAGAENKLYLCPLLAELLSNAMAFLQKPSSTKLLPSE 384 (874) T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH T ss_conf 99999829975345420458999999999718776789999987430366546879999999999999731435689899 Q ss_pred --HHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE Q ss_conf --9999998503469999811352389999999999999852----0568989999988501001321123578853030 Q 537021.9.peg.4 502 --DFFTLILGAKKGRQQFISRFGNEVIDVLDEFLNFTLRNEQ----NSYSSLQELISELEQYPPTIKRAHSANHNEVRIM 575 (952) Q Consensus 502 --~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~e~----~~~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~im 575 (952) T Consensus 385 W~~~f~~~L~~~gwPg~--~~L~S~EyQ~~~~~~~~L~~la~Ld~~~~~~~~~eal~~L~~~l~~~~fqp~~~~~~iQVm 462 (874) T TIGR03623 385 WAARFQRWLKALGWPGD--RALDSEEYQAVKAWKELLAEFAALDRVSPLLTFSEALRLLRQLAAETLFQPETPEAPIQVL 462 (874) T ss_pred HHHHHHHHHHHCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEE T ss_conf 99999999986379755--6678299999999999999998630124457899999999999852578998999972684 Q ss_pred CHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 01221456777799815887767765444222344555666631235444578747799999997644446788787511 Q 537021.9.peg.4 576 TVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGM 655 (952) Q Consensus 576 TiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAl 655 (952) T Consensus 463 G~LEa~gl~Fd~lwvlg~~e~~~P~~~~~~pfiP~~lqr~~~~p~~~-----------------~~~~~~~a~~~~~rl~ 525 (874) T TIGR03623 463 GLLEAAGLQFDALWVMGLTDEVWPAPPRPNPFLPLALQRAVGMPHAS-----------------AERELDYARQVTQRLL 525 (874) T ss_pred CHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC-----------------HHHHHHHHHHHHHHHH T ss_conf 12443579757178835887778999999998899999972999999-----------------9999999999999998 Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 46652899983167777666543210688731035643322223454444332221101223554432100012222100 Q 537021.9.peg.4 656 TRASDQLIICKHSNTSNEKKSNQRTWYDMVYDSFHNDERVKKIKLTNSINKDEWIAYEWSTHHPENTPLEREETIKQLMD 735 (952) Q Consensus 656 TRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (952) T Consensus 526 ~~A~-~v~~Sy~~~~~~~~-~~pSpLi~~~~~~~~~~~-----------~~~~~~~~--------------~~~~~~~~~ 578 (874) T TIGR03623 526 RSAP-EVVFSYPQRDGDRE-LRPSPLIAHLPLKAEEDA-----------ELADYQDL--------------ADAVAAGRR 578 (874) T ss_pred HCCC-CEEEEECCCCCCCC-CCCCHHHHCCCCCCHHHH-----------CCCCCCCC--------------HHHHHHHCC T ss_conf 4189-48998348889853-576765431563113331-----------36665552--------------455530014 Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHCCHHCCCCCC-------------CCCCCCHHHHHHHHHHHHHHHCCC------- Q ss_conf 001124530334433233423361110010015554-------------446630155677999999985668------- Q 537021.9.peg.4 736 EQKIPKKLFSPIKNDINEPYILNPSTIDTKGKTNLE-------------SLLSDNQTFNRGLIIHKLLQVIFT------- 795 (952) Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~-------------~~~~~~~a~~~Gt~vH~~lE~l~~------- 795 (952) T Consensus 579 ~e~~~d~~-a~-~~~~~~~~~gg~s~L~~qa~CPf~~f~~~rL~~~~~~~~~~gl~~~~rG~i~H~~Le~~~~~l~~~~~ 656 (874) T TIGR03623 579 LEVLDDAQ-AP-PLEAGERISGGTGLLKAQAACPFRAFAQHRLGARALEEPVDGLDALERGTLVHRVLELFWERLKNQAA 656 (874) T ss_pred CEECCCCC-CC-CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH T ss_conf 14510256-76-66653435672899998870929999999849988898666779777659999999999998257364 Q ss_pred ---CCHHHHHHHHHHH----HHH----HCCCCCH----HHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCC Q ss_conf ---9965689999999----850----0458998----899999999999862965578717778561137888623888 Q 537021.9.peg.4 796 ---LPEHKRKNFITSY----CTK----NAKLWPA----KEYKNLLLSITRLLENPMMTTAMSCDSYSEVSVSGKINCPKK 860 (952) Q Consensus 796 ---~~~~~~~~~~~~~----l~~----~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Ev~~e~~~~~~~~ 860 (952) T Consensus 657 L~~l~~~~l~~~i~~a~~~~l~~~~~~~~~~~~~~~~~le~~rl~~~l~~~L~~e~~r~-----pF~v~~~E~~~~~~~~ 731 (874) T TIGR03623 657 LNALDEAELEQLIAEAIGEALAEEEARHSQTFPERFLELEQERLLQLLLEWLELERQRP-----PFEVVATEQNHSIEIG 731 (874) T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCEEEEECCCCEEEEC T ss_conf 54189999999999999999999876434345489999999999999999999755679-----9138872156415675 Q ss_pred CEEEEEEEEEEEEEC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 589997977899979-989999725801389998999998899999999999 Q 537021.9.peg.4 861 DIIISGRIDQISISQ-QNIFIFEYKTHHHVPQEIEHIPYTHIAQLSIYEKIL 911 (952) Q Consensus 861 ~~~i~G~IDri~~~~-~~~~IiDyKT~~~~~~~~~~~~~~Y~~QL~~Y~~al 911 (952) T Consensus 732 ~l~l~~riDRiD~~~dG~~~IiDYKTG~~~~~~~~~~r-~~~pQLplYa~~~ 782 (874) T TIGR03623 732 GLELKVRIDRIDRLADGRRLIIDYKTGAPSVRDWLGER-PVEPQLPLYALLA 782 (874) T ss_pred CEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHCCC-CCCCCHHHHHHHC T ss_conf 78997687443016999889998279999850222178-4445489999871

HHsearch alignment for GI: peg_410 and conserved domain: TIGR03623