HHsearch alignment for GI: peg_410 and conserved domain: pfam06250
>pfam06250 DUF1016 Protein of unknown function (DUF1016). Family of uncharacterized proteins found in viruses, archaea and bacteria.
Probab=94.47 E-value=0.12 Score=28.32 Aligned_cols=83 Identities=17% Similarity=0.324 Sum_probs=51.4
Q ss_pred CHHHHHH-HHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEC--CEEEEEECCCCCCCCCCH
Q ss_conf 9889999-9999999862965578717778561137888623888589997977899979--989999725801389998
Q 537021.9.peg.4 817 PAKEYKN-LLLSITRLLENPMMTTAMSCDSYSEVSVSGKINCPKKDIIISGRIDQISISQ--QNIFIFEYKTHHHVPQEI 893 (952)
Q Consensus 817 ~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~Ev~~e~~~~~~~~~~~i~G~IDri~~~~--~~~~IiDyKT~~~~~~~~ 893 (952)
T Consensus 183 ~E~dLE~ali~~i~~FLLE--LG~GF-----aFvgrQ~ri~v~~~dfy----iDLlFYh~~L~c~V~IELK~g~f~p--- 248 (320)
T pfam06250 183 SEKDLEKALINHLEKFLLE--LGAGF-----AFVGRQKRIQVDDEDFY----IDLLFYHRKLRCLVAVDLKIGKFKP--- 248 (320)
T ss_pred CHHHHHHHHHHHHHHHHHH--HCCCC-----EEEEEEEEEEECCCEEE----HHHHHHHHHCCCEEEEEECCCCCCH---
T ss_conf 8899999999999999998--18981-----67545578887793234----0476663411413677641587677---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC--CCC
Q ss_conf 9999988999999999999967--998
Q 537021.9.peg.4 894 EHIPYTHIAQLSIYEKILKDSY--PNK 918 (952)
Q Consensus 894 ~~~~~~Y~~QL~~Y~~al~~~~--p~~ 918 (952)
T Consensus 249 -----e~~GQl~~Yl~~~d~~~k~~~d 270 (320)
T pfam06250 249 -----EYAGQMNFYLRYLDKHEKQPGE 270 (320)
T ss_pred -----HHHHHHHHHHHHHHHHHCCCCC
T ss_conf -----8888899999999888568889