HHsearch results for GI: peg_410 and protein with PDBid: 1w36_B
>1w36_B RECB, exodeoxyribonuclease V beta chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.24 PDB: 3k70_B*
Probab=100.00 E-value=0 Score=764.48 Aligned_cols=756 Identities=16% Similarity=0.192 Sum_probs=460.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHC
Q ss_conf 89999999999999999998699775899999999831584248999998617989998071019999999999984100
Q 537021.9.peg.4 124 LASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDF 203 (952)
Q Consensus 124 ~~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~~~~ 203 (952)
..+.+++..+.+.|.+.|+++|.+||+||++.+.++|.+++ .+.++.+++.+|+|||||||||||++||+||+.|+.+
T Consensus 326 ~~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~ll~~~~-~~~l~~~l~~r~~~ilVDEfQDTn~~Q~~il~~L~~~- 403 (1180)
T 1w36_B 326 LVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSES-GEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHH- 403 (1180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTEECHHHHHHHHHHHHHSTT-HHHHHHHHHHHCSEEEECSGGGCCHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC-HHHHHHHHHHHCCEEEEEHHHCCHHHHHHHHHHHHHC-
T ss_conf 99999999999999999998399980999999999975212-6999999996398999961532399999999999716-
Q ss_pred CCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 24676667686499996665676542488847899999996652134576531200686668878999999999711210
Q 537021.9.peg.4 204 FVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPEN 283 (952)
Q Consensus 204 ~~~~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~~~N~~f~~~~~ 283 (952)
..++++|+|||||||||+||||||.+|.++.+.+. +.+.|++||||+++||+++|.+|.+...
T Consensus 404 -------~~~~~l~~VGDpkQSIY~FRgAd~~~~~~~~~~~~----------~~~~L~~N~RS~~~Il~~~N~lf~~~~~ 466 (1180)
T 1w36_B 404 -------QPETALLLIGDPKQAIYAFRGADIFTYMKARSEVH----------AHYTLDTNWRSAPGMVNSVNKLFSQTDD 466 (1180)
T ss_dssp -------CTTCEEEEEECGGGCCCGGGTCCHHHHHHHHHHCC----------CEEECCEETTSCHHHHHHHHHHHHSSSS
T ss_pred -------CCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHH----------HHCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf -------89871899807865330335777799999987643----------4202442457748999999999972522
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Q ss_conf 0123322122212233447888743651134443223343101111100011133336888999999999999835862-
Q 537021.9.peg.4 284 AQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTI- 362 (952)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~I~~l~~~~~~- 362 (952)
..........+ ..+..... ..... . .....+....+....+...........|+.++..|++++..+..
T Consensus 467 ~~~~~~~~~~~--~~~~~~~~--~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~I~~ll~~~~~~ 536 (1180)
T 1w36_B 467 AFMFREIPFIP--VKSAGKNQ--ALRFV---F---KGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRG 536 (1180)
T ss_dssp TTSSTTSCCCC--CEECGGGT--TEEEE---E---TTEEECSEEEEECCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCC--HHCCCCCC--CCCCC---C---CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11123345310--00025554--43324---6---666665420220466664310377789999999999999820011
Q ss_pred ----CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEE-ECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf ----2125436878244689861531012248999998741697366-04862112331052268768887481311024
Q 537021.9.peg.4 363 ----FSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVV-GNDRFILTDHLAIKDLMALGRFILSQEDDLSF 437 (952)
Q Consensus 363 ----~~~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~~ip~~-~~~~~~~~~~~~v~~l~a~l~~l~~p~~~~~~ 437 (952)
......|+++++|||||||++++...+...| ..+|||+. ..++.++++++++.+++++|+++.+|.++..+
T Consensus 537 ~~~~~~~~~~r~~~~~DIaILvR~~~~~~~i~~~L----~~~gIp~~~~~~~~~~~~~~ev~~ll~ll~~l~~p~~~~~l 612 (1180)
T 1w36_B 537 EALLMNGDDARPVRASDISVLVRSRQEAAQVRDAL----TLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTL 612 (1180)
T ss_dssp CEEEEETTEEEECCGGGEEEEESSHHHHHHHHHHH----HTTTCCEEETTCCCBGGGSSHHHHHHHHHHHHTCTTSHHHH
T ss_pred HHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH----HHCCCCEEEECCCHHHHHCHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 12321454346778142799971537689999889----87499849946731364088999999999861484538999
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH
Q ss_conf 54305877478888999987301268657888764311115899999999999998642199899999998503469999
Q 537021.9.peg.4 438 VCMLKSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQF 517 (952)
Q Consensus 438 ~~~L~spl~g~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 517 (952)
..+|+||++|++..++..+.... ..+....+.+..++.......+.++++.++........+
T Consensus 613 ~~~l~s~~~g~~~~~l~~l~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~l 674 (1180)
T 1w36_B 613 RSALATSMMGLNALDIETLNNDE------------------HAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENL 674 (1180)
T ss_dssp HHHHHSGGGTCCHHHHHHHHHCH------------------HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHCH------------------HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99983734599999999984345------------------778999998999999998667089999999876799999
Q ss_pred HHCCC-HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC-------CCCCCCCCCCCCCEEECHHHCCCCCCCEEE
Q ss_conf 81135-2389999999999999852056898999998850100-------132112357885303001221456777799
Q 537021.9.peg.4 518 ISRFG-NEVIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPP-------TIKRAHSANHNEVRIMTVHTAKGLESPVVF 589 (952)
Q Consensus 518 ~~~~~-~~~~~~l~~l~~~a~~~e~~~~~~l~~f~~~l~~~~~-------~~~~~~~~~~d~V~imTiH~SKGLEfpvV~ 589 (952)
....+ .....|+..+.+.+..+ .....++..|+.|+..... .......++.++|+|||||+|||||||+||
T Consensus 675 ~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~imTiHkSKGLEfpvV~ 753 (1180)
T 1w36_B 675 LATAGGERRLTDILHISELLQEA-GTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVW 753 (1180)
T ss_dssp HHSSSHHHHHHHHHHHHHHHHHH-HTTCSCHHHHHHHHHHHHHSCCCCSTTBCCCCTTGGGSEEEEETTTTSSCCEEEEE
T ss_pred HHCCCHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEE
T ss_conf 86057689999999999999999-87423278999999999860121124554212203670689741541676678899
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 81588776776544422234455566663123544457874779999999764444678878751146652899983167
Q 537021.9.peg.4 590 LVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSN 669 (952)
Q Consensus 590 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~ 669 (952)
||+++++.++....... . ....... ............+.+..+|++|||||||||||++|+|++...
T Consensus 754 v~~~~~~~~~~~~~~~~----~-~~~~~~~--------~~~~~~~~~~~~~~e~l~Ee~RLlYVAlTRAk~~L~l~~~~~ 820 (1180)
T 1w36_B 754 LPFITNFRVQEQAFYHD----R-HSFEAVL--------DLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPL 820 (1180)
T ss_dssp ETTTTCCCCCCSCEEEC----T-TTCCEEE--------ESSCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECCC
T ss_pred EECCCCCCCCCCCCCCC----C-CCCCCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEC
T ss_conf 93675677766666653----1-0100014--------655465677687899888887876304522335689998401
Q ss_pred CCCCCCCCC--CCCHHHHHHCCCCCCCCCCCCC---CCCCCCCCCC--------CCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 777666543--2106887310356433222234---5444433222--------11012235544321000122221000
Q 537021.9.peg.4 670 TSNEKKSNQ--RTWYDMVYDSFHNDERVKKIKL---TNSINKDEWI--------AYEWSTHHPENTPLEREETIKQLMDE 736 (952)
Q Consensus 670 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (952)
......... ......+............... .......... ................. ........
T Consensus 821 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 899 (1180)
T 1w36_B 821 VRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAK-TLQRLPGD 899 (1180)
T ss_dssp CCSCSCCSSCCGGGGSHHHHHHTCSSCCCHHHHHHHHHHSCSTTEEEEECCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC-CCCCCCCC
T ss_conf 33457766652556766788862677554146899888753776432245543233334565541121221-24556554
Q ss_pred HHHHHHHCCCCCCC------CCCCCCCCHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 01124530334433------233423361110010015554446630155677999999985668996568999999985
Q 537021.9.peg.4 737 QKIPKKLFSPIKND------INEPYILNPSTIDTKGKTNLESLLSDNQTFNRGLIIHKLLQVIFTLPEHKRKNFITSYCT 810 (952)
Q Consensus 737 ~~~~~~~~~~~~~~------~~~~~~l~~s~~~~~~~~~~~~~~~~~~a~~~Gt~vH~~lE~l~~~~~~~~~~~~~~~l~ 810 (952)
......+....... ..................+.......+.|+.+||++|++||++++....+. ..+.+.+.
T Consensus 900 ~~~~~s~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ga~~Gt~~H~ilE~ldf~~~~~~-~~i~~~l~ 978 (1180)
T 1w36_B 900 NWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDP-NWVREKLE 978 (1180)
T ss_dssp CEEEESSCSSSCSSCTTHHHHCTTSCTTCCCCCCSCCCSSCCGGGSCCSHHHHHHHHHHTTSCCSSSCCCH-HHHHHHHH
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCH-HHHHHHHH
T ss_conf 32203726664401345554454545553344210027767800147637689999999984899999999-99999998
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHCCHH------HHHHHCCCCCCCEEEEEEEEC--------------------------C
Q ss_conf 00458998899999999999862965------578717778561137888623--------------------------8
Q 537021.9.peg.4 811 KNAKLWPAKEYKNLLLSITRLLENPM------MTTAMSCDSYSEVSVSGKINC--------------------------P 858 (952)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~Ev~~e~~~~~--------------------------~ 858 (952)
.. .........+.+.+..++..+. +..+.......|++|..++.. .
T Consensus 979 ~~--~~~~~~~~~~~~~l~~~l~~pL~~~~~~l~~~~~~~~~~E~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1180)
T 1w36_B 979 LG--GFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEMEFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFM 1056 (1180)
T ss_dssp HT--TCCGGGHHHHHHHHHHHHSSCSSSSSCCGGGCCGGGEEEEEEEEEEECSCCCHHHHHHHHHHHCSSTTSCCCCCSC
T ss_pred HC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 54--9970225999999999980858776766544772021650153222562202888999997336300125432343
Q ss_pred CCCEEEEEEEEEEEEECCEEEEEECCCCCCCCCC----HHH-----HHHHHHHHHHHHHHHHHHHC----CCCCE-----
Q ss_conf 8858999797789997998999972580138999----899-----99988999999999999967----99827-----
Q 537021.9.peg.4 859 KKDIIISGRIDQISISQQNIFIFEYKTHHHVPQE----IEH-----IPYTHIAQLSIYEKILKDSY----PNKSL----- 920 (952)
Q Consensus 859 ~~~~~i~G~IDri~~~~~~~~IiDyKT~~~~~~~----~~~-----~~~~Y~~QL~~Y~~al~~~~----p~~~V----- 920 (952)
...++|+|+||++|.++|+++|||||||+..++. .+. ..++|..||.+|+.||+++. |+...
T Consensus 1057 ~~~g~l~G~IDlvf~~dg~~~IvDYKTd~lg~~~~~y~~~~l~~~m~~~~Y~lQ~~lY~~AL~r~L~~r~~~y~~~~h~G 1136 (1180)
T 1w36_B 1057 QVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFG 1136 (1180)
T ss_dssp CCEEEEEEEEEEEEBSSSCBCCEEEECCCCCSSGGGSBHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHSSSCCHHHHCC
T ss_pred CCEEEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
T ss_conf 54146999999999999999999727899899841029999999988786199999999999999707077987455178
Q ss_pred EEEEEECCC--------CEEEECCHHHHHHHHHHHH
Q ss_conf 899998559--------8789879899999999765
Q 537021.9.peg.4 921 VCLLIYVSE--------PKVFIIPQNKLNKAFAEIS 948 (952)
Q Consensus 921 ~~~l~y~~~--------~~~~~~~~~~l~~~~~~~~ 948 (952)
.++.+|+++ |-..+.|+.+|=.+|+++-
T Consensus 1137 g~~YlFlRG~~~~~~~~G~~~~~p~~~~i~~ld~l~ 1172 (1180)
T 1w36_B 1137 GVIYLFLRGVDKEHPQQGIYTTRPNAGLIALMDEMF 1172 (1180)
T ss_dssp CCEEEESSSCCTTCTTBSCCBCCCCSSHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf 279999479899999996685059999999999985