HHsearch results for GI: peg_410 and protein with PDBid: 1w36_C
>1w36_C RECC, exodeoxyribonuclease V gamma chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.25 PDB: 3k70_C*
Probab=99.97 E-value=2.1e-26 Score=206.27 Aligned_cols=543 Identities=11% Similarity=0.090 Sum_probs=276.1
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH----CCCCEEECCCCCCCCC
Q ss_conf 368889999999999998358622125436878244689861531012248999998741----6973660486211233
Q 537021.9.peg.4 340 SSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKND----YKISVVGNDRFILTDH 415 (952)
Q Consensus 340 ~~~~~~a~~i~~~I~~l~~~~~~~~~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~----~~ip~~~~~~~~~~~~ 415 (952)
......++.|+.+|.+++..+. .++|+||+|+++.... |...+.+.+.. .+||+...++..+..+
T Consensus 380 ~s~~rEvE~l~~~Il~ll~~~~--------~l~p~DIaVl~pdi~~---Y~p~I~avF~~~~~~~~IP~~i~~~~~~~~~ 448 (1122)
T 1w36_C 380 HSPQREVEVLHDRLLAMLEEDP--------TLTPRDIIVMVADIDS---YSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 (1122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHST--------TCCGGGEEEEESCHHH---HHHHHHHHTSCCSSTTCCCCEECSEETGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHCCC--------CCCCCCEEEECCCHHH---HHHHHHHHHHCCCCCCCCCEEECCCHHHHCC
T ss_conf 9989999999999999974288--------8882126787288798---8999999861024567887241352043205
Q ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHCCCCC----CCCCHHHHHHHHHHCCC---------------------CCCHHHHH
Q ss_conf 105226876888748131102454305877----47888899998730126---------------------86578887
Q 537021.9.peg.4 416 LAIKDLMALGRFILSQEDDLSFVCMLKSPL----FNFSEDDIFKICTQRHE---------------------TETVYEYI 470 (952)
Q Consensus 416 ~~v~~l~a~l~~l~~p~~~~~~~~~L~spl----~g~~~~~l~~l~~~~~~---------------------~~~~~~~~ 470 (952)
+.+..+++++....+......+..+|.+|. ++++..++..+..-... ..++....
T Consensus 449 pl~~~l~~lL~l~~~r~~~~~vl~lL~~p~l~~~f~l~~~~~~~l~~~~~~~gir~g~~~~~~~~~~~~~~~~~tw~~~l 528 (1122)
T 1w36_C 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 (1122)
T ss_dssp HHHHHHHHHTTGGGCCCCHHHHHHHTTSHHHHHHTTCCHHHHHHHHHHHHHHTCCSCSCHHHHHHTTCCCCSSSSHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHH
T ss_conf 89999999998741799999999997681423213898789999999999808765743566787604521113487767
Q ss_pred HHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHCCHHHHHHHCCCHH
Q ss_conf 643-------------------------1111589999999999999864219-98999999985034699998113523
Q 537021.9.peg.4 471 QKF-------------------------ANCGISKFQHVIKYIHELIHIAQFC-SPHDFFTLILGAKKGRQQFISRFGNE 524 (952)
Q Consensus 471 ~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~ 524 (952)
... .......+..+...+..+....... +..+....+.. ....+......+
T Consensus 529 ~Rlllg~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~l~~L~~~~~~l~~~~t~~~w~~~l~~---lL~~~~~~~~~~ 605 (1122)
T 1w36_C 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD---MLNAFFLPDAET 605 (1122)
T ss_dssp HHHHHHHSSCSTTCCSSSCCCCTTSCSSTHHHHHHHHHHHHHHHHHHHHTSSCEEHHHHTTHHHH---HHHHHCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH---HHHHHHCCCHHH
T ss_conf 77765432013455641234500122226999999999999999999997188989999999999---999974888668
Q ss_pred ------HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCC
Q ss_conf ------89999999999999852056898999998850100132112357885303001221456777799815887767
Q 537021.9.peg.4 525 ------VIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVF 598 (952)
Q Consensus 525 ------~~~~l~~l~~~a~~~e~~~~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~~~ 598 (952)
..+.+.++++...........++..|...+...-...........|+|+|+|+|.+||++|++|||.|++++.+
T Consensus 606 ~~~~~~~~~~l~~l~~~~~~~~~~~~l~l~~~~~~L~~~l~~~~~~~~~~~~~V~v~tl~~~R~ipfkvVfllGlndg~f 685 (1122)
T 1w36_C 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 (1122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCSEECHHHHHHHHHHHHHHCEECTTTTSSSCEEECCCTTCCCCEEEEEEECCBTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCEEEEEECCCCCC
T ss_conf 99999999999999999987236764389999999998740134567898997698112553578867699973366757
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCCCCC
Q ss_conf 7654442223445556666312354445787477999999976444467887875114665289998316777-766654
Q 537021.9.peg.4 599 SHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTS-NEKKSN 677 (952)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~-~~~~~~ 677 (952)
|.......+....... ... .....+|++++||+|+|+|+++||||++.... +.....
T Consensus 686 P~~~~~~~fdl~~~~~---------~~g-------------d~~~~~edr~lfl~al~sA~~~L~lSy~~~~~~~~~~~~ 743 (1122)
T 1w36_C 686 PRQLAPLGFDLMSQKP---------KRG-------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 (1122)
T ss_dssp SCCCCCCSSCHHHHSC---------CTT-------------CCCHHHHHHHHHHHHHHHEEEEEEEEEECBCSSSCCBCC
T ss_pred CCCCCCCCCCCHHHCC---------CCC-------------CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
T ss_conf 6656666653154423---------668-------------810657899999999997544231444123278998348
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCC------CCCCCCCCCCCC---CCC--CCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 32106887310356433222234544------443322211012---235--5443210001222210000112453033
Q 537021.9.peg.4 678 QRTWYDMVYDSFHNDERVKKIKLTNS------INKDEWIAYEWS---THH--PENTPLEREETIKQLMDEQKIPKKLFSP 746 (952)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (952)
++.+...+.................. ............ ... ..........................
T Consensus 744 PS~~l~eL~d~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~h~l~~fs~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 821 (1122)
T 1w36_C 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV-- 821 (1122)
T ss_dssp BCHHHHHHHHHHHTTEECSSCSSSCHHHHHHHHHHHHCCBCCSSTTSGGGSSSSTTCCSCGGGHHHHTTCCCCCCCSC--
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC--
T ss_conf 778999999999742357774334632004678865401266788885553004323440999876325455676445--
Q ss_pred CCCCCCCCCCCCHHHCCHHCCCCCCCCC--------------------CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 4433233423361110010015554446--------------------63015567799999998566899656899999
Q 537021.9.peg.4 747 IKNDINEPYILNPSTIDTKGKTNLESLL--------------------SDNQTFNRGLIIHKLLQVIFTLPEHKRKNFIT 806 (952)
Q Consensus 747 ~~~~~~~~~~l~~s~~~~~~~~~~~~~~--------------------~~~~a~~~Gt~vH~~lE~l~~~~~~~~~~~~~ 806 (952)
.......+..++.|.+.....||..... -..++...+.+.|.+++.+-.... ...+..
T Consensus 822 ~~l~~~~~~~ls~s~L~~f~~~P~~~fl~~~L~~~~~~~~~~~~d~Ep~~ld~L~~~~l~~~ll~~~l~~~~--~~~~~~ 899 (1122)
T 1w36_C 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD--AERLFR 899 (1122)
T ss_dssp CCCCCCCCSCEEHHHHHHHSSSHHHHHHHTTTCCCCCCSCCCCCSSCCSSCCHHHHHHHHHHHHHHHHTTCC--HHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--HHHHHH
T ss_conf 689987788448999999997968999997448888621224555686667706552499999999871899--999999
Q ss_pred HHHHHHCCCCCHH-----HHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEE
Q ss_conf 9985004589988-----99999999999862965578717778561137888623888589997977899979989999
Q 537021.9.peg.4 807 SYCTKNAKLWPAK-----EYKNLLLSITRLLENPMMTTAMSCDSYSEVSVSGKINCPKKDIIISGRIDQISISQQNIFIF 881 (952)
Q Consensus 807 ~~l~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~Ev~~e~~~~~~~~~~~i~G~IDri~~~~~~~~Ii 881 (952)
+... .+ .++.. ..+.....+..+++. +... .....++++ ....++..|+|+||.|. +++ +|
T Consensus 900 ~~~~-~g-~LP~g~~g~~~~~~~~~~~~~l~~~--~~~~--~~~~~~~~~----~l~~~~~~L~G~l~~v~--~~~--~v 965 (1122)
T 1w36_C 900 RFRA-AG-DLPYGAFGEIFWETQCQEMQQLADR--VIAC--RQPGQSMEI----DLACNGVQITGWLPQVQ--PDG--LL 965 (1122)
T ss_dssp HHHH-HT-CSCSHHHHHHHHHHHHHHHHHHHHH--HHTT--CCCCEEEEE----EEEETTEEEEEEEEEEC--SSE--EE
T ss_pred HHHH-CC-CCCCCHHHHHHHHHHHHHHHHHHHH--HHHH--CCCCCCEEE----EEEECCEEEEEEECCCC--CCC--EE
T ss_conf 9997-59-9998255699999999999999999--9870--688886348----98409889999889862--683--59
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE--EECCHHHHHHHHHH
Q ss_conf 725801389998999998899999999999996799827899998559878--98798999999997
Q 537021.9.peg.4 882 EYKTHHHVPQEIEHIPYTHIAQLSIYEKILKDSYPNKSLVCLLIYVSEPKV--FIIPQNKLNKAFAE 946 (952)
Q Consensus 882 DyKT~~~~~~~~~~~~~~Y~~QL~~Y~~al~~~~p~~~V~~~l~y~~~~~~--~~~~~~~l~~~~~~ 946 (952)
.|++++.. .. ...++-+...+++.. +.+....++....+.+ -+++++.-...|..
T Consensus 966 ~~~~~~~~---~~-----~~l~~wl~hL~~~a~--~~~~~~~~~~~~~~~~~~~p~~~~~A~~~L~~ 1022 (1122)
T 1w36_C 966 RWRPSLLS---VA-----QGMQLWLEHLVYCAS--GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 (1122)
T ss_dssp EECSSCCC---HH-----HHHHHHHHHHHHHHT--SCCCEEEEECGGGCEEEECCCCHHHHHHHHHH
T ss_pred EEEECCCC---HH-----HHHHHHHHHHHHHHC--CCCCCEEEEEECCCEEEECCCCHHHHHHHHHH
T ss_conf 99727898---78-----899999999999826--99997289997696799899897999999999