HHsearch results for GI: peg_410 and protein with PDBid: 2is6_A
>2is6_A DNA helicase II; hydrolase/DNA complex; HET: DNA ADP; 2.20A {Escherichia coli} PDB: 2is2_A* 2is1_A* 2is4_A*
Probab=100.00 E-value=0 Score=478.30 Aligned_cols=440 Identities=21% Similarity=0.276 Sum_probs=312.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999986997758999999998315842489999986179899980710199999999999841002
Q 537021.9.peg.4 125 ASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFF 204 (952)
Q Consensus 125 ~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~~~~~ 204 (952)
........++..|.+.+..+|.+||+|++..+.+++...+. ++..++.+|+||+||||||||++|++|++.+.+
T Consensus 165 ~~~~~~~~~~~~y~~~~~~~~~~~f~~~~~~~~~l~~~~~~---i~~~~~~~~~~i~vDE~QD~~~~q~~~l~~l~~--- 238 (680)
T 2is6_A 165 PVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPH---ILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG--- 238 (680)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTEEEHHHHHHHHHHHHHHCHH---HHHHHHHHCCEEEESSGGGCCHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHH---HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC---
T ss_conf 89999999999999999886997868899999999860999---999999754700206666679999999987635---
Q ss_pred CCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 46766676864999966656765424888478999999966521345765312006866688789999999997112100
Q 537021.9.peg.4 205 VGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENA 284 (952)
Q Consensus 205 ~~~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~~~N~~f~~~~~~ 284 (952)
.+.++++|||||||||+||||++..|.++...|+ +.+.+.|++||||+++|++++|.+|.+...+
T Consensus 239 -------~~~~~~~vGD~~QsIy~frga~~~~~~~~~~~~~--------~~~~~~L~~NyRs~~~I~~~an~l~~~~~~~ 303 (680)
T 2is6_A 239 -------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFP--------GAETIRLEQNYRSTSNILSAANALIENNNGR 303 (680)
T ss_dssp -------TTCEEEEEECGGGCCCGGGTCCTHHHHHHHHHST--------TCEEEECCBCCSSCHHHHHHHHHHHHTSSSC
T ss_pred -------CCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHCC--------CCEEEECCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf -------7874278548576444650035789999998778--------9869978987798789999999999727333
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 12332212221223344788874365113444322334310111110001113333688899999999999983586221
Q 537021.9.peg.4 285 QGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFS 364 (952)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~I~~l~~~~~~~~ 364 (952)
..... .+ ....++.+.+.. .......+..|+..|..+..++
T Consensus 304 ~~~~l--------~~-~~~~~~~i~~~~--------------------------~~~~~~e~~~i~~~i~~~~~~g---- 344 (680)
T 2is6_A 304 LGKKL--------WT-DGADGEPISLYC--------------------------AFNELDEARFVVNRIKTWQDNG---- 344 (680)
T ss_dssp CCCCC--------BC-CSCCCSCEEEEE--------------------------EEEHHHHHHHHHHHHHHHHHTT----
T ss_pred CCCCC--------CC-CCCCCCCEEEEE--------------------------CCCHHHHHHHHHHHHHHHHHCC----
T ss_conf 56533--------45-567899627994--------------------------5986899999999999998759----
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCC
Q ss_conf 25436878244689861531012248999998741697366048621123310522687688874813110245430587
Q 537021.9.peg.4 365 NGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCMLKSP 444 (952)
Q Consensus 365 ~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~~ip~~~~~~~~~~~~~~v~~l~a~l~~l~~p~~~~~~~~~L~sp 444 (952)
..++||+||+|++.....+...| ...|||+...++.++++++++++++++|+++.+|.++.++..++.+|
T Consensus 345 ------~~~~diaiL~r~~~~~~~l~~~L----~~~~Ip~~~~~~~~~~~~~ev~~~l~~l~~l~~~~d~~~~~~~l~~~ 414 (680)
T 2is6_A 345 ------GALAECAILYRSNAQSRVLEEAL----LQASMPYRIYGGMRFFERQEIKDALSYLRLIVNRNDDAAFERVVNTP 414 (680)
T ss_dssp ------CCGGGEEEEESSGGGHHHHHHHH----HHTTCCEEECSSSCGGGSHHHHHHHHHHHHHHCTTCHHHHHHHTTSS
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHH----HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf ------97567344874067799999999----97699889958976103499999999999980988669999998353
Q ss_pred CCCCCHHHHHHHHHHCCCCC-CHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH
Q ss_conf 74788889999873012686-57888764------311115899999999999998642199899999998503469999
Q 537021.9.peg.4 445 LFNFSEDDIFKICTQRHETE-TVYEYIQK------FANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQF 517 (952)
Q Consensus 445 l~g~~~~~l~~l~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 517 (952)
++|++...+..+........ .+...... ...........+...+..................+.........+
T Consensus 415 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (680)
T 2is6_A 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMY 494 (680)
T ss_dssp CCSCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHHHHTSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 34889999999999887410257888887643100134568999999998777888741020578999998766679998
Q ss_pred HHCCCHHHH---HHHHHHHHHHHHHHHCC----CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEE
Q ss_conf 811352389---99999999999985205----68989999988501001321123578853030012214567777998
Q 537021.9.peg.4 518 ISRFGNEVI---DVLDEFLNFTLRNEQNS----YSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFL 590 (952)
Q Consensus 518 ~~~~~~~~~---~~l~~l~~~a~~~e~~~----~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~imTiH~SKGLEfpvV~i 590 (952)
......... ..+..++..+..+.... ...+..++......... .......++|+|||||+|||||||+|||
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~d~V~l~TiH~sKGLEfd~Vil 572 (680)
T 2is6_A 495 EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE--GQADTWQDAVQLMTLHSAKGLEFPQVFI 572 (680)
T ss_dssp HTTCSHHHHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHTGGG--CSCCCSSCCEEEEEHHHHTTCCEEEEEE
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEEEHHCCCCCCCCEEEE
T ss_conf 73247566788899999999999876315421013799999998752023--4346779959995142001125888999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 15887767765444222344555666631235444578747799999997644446788787511466528999831677
Q 537021.9.peg.4 591 VDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNT 670 (952)
Q Consensus 591 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~ 670 (952)
+|+.++.+|+.... ......+||||||||||||||++|+|+++...
T Consensus 573 ~~~~~g~fP~~~~~----------------------------------~~~~~~eEErRL~YVA~TRAk~~L~l~~~~~~ 618 (680)
T 2is6_A 573 VGMEEGMFPSQMSL----------------------------------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETR 618 (680)
T ss_dssp CCCBTBTTTBHHHH----------------------------------SSSSTHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ECCCCCCCCCCCCC----------------------------------CCCHHHHHHHHHHHHHHHHHHCEEEEEEECCC
T ss_conf 67818998752458----------------------------------87421699998999898368457899986602