HHsearch results for GI: peg_410 and protein with PDBid: 3e1s_A
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, hydrolase; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=96.56 E-value=0.006 Score=36.26 Aligned_cols=47 Identities=30% Similarity=0.338 Sum_probs=35.8
Q ss_pred ECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00122145677779981588776776544422234455566663123544457874779999999764444678878751
Q 537021.9.peg.4 575 MTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVG 654 (952)
Q Consensus 575 mTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVA 654 (952)
||||||.|.|||.||++- .....+ .-.++|+|||
T Consensus 494 ~TvHKsQGse~d~Viv~l-~~~~~~---------------------------------------------~l~r~llYvA 527 (574)
T 3e1s_A 494 LTVHRAQGSEWGTVLGVL-HEAHMP---------------------------------------------MLSRNLVYTA 527 (574)
T ss_dssp EEHHHHTTCCEEEEEEEE-CGGGGG---------------------------------------------GCCHHHHHHH
T ss_pred EEEECCCCCCCCEEEEEC-CCCCCC---------------------------------------------CCCCCEEEHH
T ss_conf 367422004768799988-987665---------------------------------------------4552637462
Q ss_pred CCCCCCEEEEEEC
Q ss_conf 1466528999831
Q 537021.9.peg.4 655 MTRASDQLIICKH 667 (952)
Q Consensus 655 lTRAk~~L~l~~~ 667 (952)
+||||++|+|.|.
T Consensus 528 iTRAk~~l~ivg~ 540 (574)
T 3e1s_A 528 LTRARDRFFSAGS 540 (574)
T ss_dssp HHTEEEEEEEEEC
T ss_pred HHHHHCEEEEEEC
T ss_conf 6666384899998