PSIBLAST alignment of GI: peg_410 and protein with PDB id: 3pjr
gi|4930230|pdb|3PJR|A Chain A, Helicase Substrate Complex Length = 724
>gi|15988533|pdb|1QHG|A Chain A, Structure Of Dna Helicase Mutant With Adpnp Length = 724
>gi|157833507|pdb|1PJR|A Chain A, Structure Of Dna Helicase Length = 724
Score = 305 bits (780), Expect = 3e-80, Method: Composition-based stats.
Identities = 117/695 (16%), Positives = 225/695 (32%), Gaps = 137/695 (19%)
Query: 6 GLSLNESYELIYKDLWPLPYFQVSDINKYVSLSMETGNPTILKKAQTLQQASQTQCIEER 65
G ++ L ++ + + V+ N + ++ Q+L +
Sbjct: 32 GAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVWIST 91
Query: 66 FSLLSSFFLTQKFTP-------------------QKNIITQEINKKSPDLKEKLKKSQDE 106
F + L + + + + I+ K + + L
Sbjct: 92 FHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAA 151
Query: 107 FIKIRDRFNTYKMFKSTLASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVS 166
++ K +++ + + Y++ +N LDF+DLI+ T L +
Sbjct: 152 KNELLPPEQFAK--RASTYYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDR---V 206
Query: 167 AWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSI 226
+ + + +I IDE QDT+ Q+ +++ L E F + + AVGD QSI
Sbjct: 207 PDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERF----------QNICAVGDADQSI 256
Query: 227 YSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQG 286
Y + GA+ + +L +R +I L ++RST IL ++V N +
Sbjct: 257 YRWRGADIQNILSFERDYPN--------AKVILLEQNYRSTKRILQAANEVIEHNVNRKP 308
Query: 287 LSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILA 346
+ + + + A
Sbjct: 309 KRIW----------------------------TENPEGKPILYYEAMNEADE-------A 333
Query: 347 RRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVG 406
+ +A I + + +D VL R + ++ + I
Sbjct: 334 QFVAGRIREAVERGER---------RYRDFAVLYRTNAQSRVMEEML----LKANIPYQI 380
Query: 407 NDRFILTDHLAIKDLMALGRFILSQEDDLSFVCMLKSPLFNFSEDDIFKI-CTQRHETET 465
D IKD++A R I + +DDLS + ++ P I K+ +
Sbjct: 381 VGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKRGIGASTIDKLVRYAADHELS 440
Query: 466 VYEYIQKFAN-----CGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQFISR 520
++E + + + + + ++ S + +L R+ +
Sbjct: 441 LFEALGELEMIGLGAKAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAE 500
Query: 521 FGNEVI---DVLDEFLNFTLRNEQ-NSYSSLQELISELEQY---PPTIKRAHSANHNEVR 573
E + LDEFL+ T E + SL +++L +A + V
Sbjct: 501 RTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLALISDLDELDGTEQAAEGDAVM 560
Query: 574 IMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVS 633
+MT+H AKGLE PVVFL+ +F H +
Sbjct: 561 LMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEE-------------------- 600
Query: 634 DLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHS 668
RL YVG+TRA ++L++
Sbjct: 601 --------------RRLAYVGITRAEEELVLTSAQ 621