RPSBLAST alignment for GI: peg_410 and conserved domain: TIGR01074
>gnl|CDD|130146 TIGR01074, rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. Length = 664
Score = 95.6 bits (238), Expect = 5e-20
Identities = 121/564 (21%), Positives = 212/564 (37%), Gaps = 150/564 (26%)
Query: 135 AHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWE 194
A Y+ + LDF+DLI+ LL++ + +R + +I ++L+DE QDT+ Q+E
Sbjct: 168 ALYQAHLRAYNALDFDDLILLPTLLLQQNEE---VRNRWQNKIRYLLVDEYQDTNTSQYE 224
Query: 195 VIRSLTEDFFVGKNTHSSPRTLF-AVGDEKQSIYSFHGAEPK--RVLREKRINQKRATNA 251
+++ L R F VGD+ QSIYS+ GA P+ +L+E K
Sbjct: 225 LVKLLV-----------GDRARFTVVGDDDQSIYSWRGARPENLVLLKEDFPQLK----- 268
Query: 252 GQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLW 311
+I+L ++RST IL + + I N + S +G +++
Sbjct: 269 -----VIKLEQNYRSTGRILKAANIL--IANNPHVFE-------KKLFSELGYGEKIKVI 314
Query: 312 EQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVI 371
E +H+ A RIA I K
Sbjct: 315 ECNNEEHE--------------------------AERIAGEIIAH------KLVNK---T 339
Query: 372 QAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQ 431
Q KD +L R + L+ + YK+S G F IKDL++ R +++
Sbjct: 340 QYKDYAILYRGNHQSRLLEKALMQNRIPYKLS--GGTSFF--SRPEIKDLLSYLRLLVNP 395
Query: 432 EDDLSFVCMLKSP--------------LFNFSEDDIFKICTQ----RHETETVYEYIQKF 473
+DD +F+ ++ +P L +F + + YE +Q+F
Sbjct: 396 DDDAAFLRIVNTPKREIGPATLEKLGELAMERNKSLFTASFDMGLLQTLSGRGYESLQRF 455
Query: 474 ANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKG----RQQFISRFGNE----- 524
++ E+ +A+ P + ++ + S E
Sbjct: 456 -----------TDWLVEIRRLAERSEPIEAVRSLIEDIDYENWLYETSPSPKAAEMRMKN 504
Query: 525 VIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLE 584
V + F +E++ +L ++++ L + ++V++MT+H +KGLE
Sbjct: 505 VNTLFSWFKEMLEGDEEDEPMTLTQVVTRLTLRDMLERGEDEEELDQVQLMTLHASKGLE 564
Query: 585 SPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQ 644
P VF+V + H+ S+ +D N+
Sbjct: 565 FPYVFIVGMEEGILPHQ--------SSIEED--------------NV------------- 589
Query: 645 EEYNRLLYVGMTRASDQL--IICK 666
EE RL YVG+TRA +L +CK
Sbjct: 590 EEERRLAYVGITRAQKELTFTLCK 613