RPSBLAST alignment for GI: peg_410 and conserved domain: TIGR01074

>gnl|CDD|130146 TIGR01074, rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. Length = 664
 Score = 95.6 bits (238), Expect = 5e-20
 Identities = 121/564 (21%), Positives = 212/564 (37%), Gaps = 150/564 (26%)

Query: 135 AHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWE 194
           A Y+   +    LDF+DLI+    LL++ +    +R +   +I ++L+DE QDT+  Q+E
Sbjct: 168 ALYQAHLRAYNALDFDDLILLPTLLLQQNEE---VRNRWQNKIRYLLVDEYQDTNTSQYE 224

Query: 195 VIRSLTEDFFVGKNTHSSPRTLF-AVGDEKQSIYSFHGAEPK--RVLREKRINQKRATNA 251
           +++ L              R  F  VGD+ QSIYS+ GA P+   +L+E     K     
Sbjct: 225 LVKLLV-----------GDRARFTVVGDDDQSIYSWRGARPENLVLLKEDFPQLK----- 268

Query: 252 GQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLW 311
                +I+L  ++RST  IL   + +  I  N            +   S +G    +++ 
Sbjct: 269 -----VIKLEQNYRSTGRILKAANIL--IANNPHVFE-------KKLFSELGYGEKIKVI 314

Query: 312 EQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVI 371
           E    +H+                          A RIA  I             K    
Sbjct: 315 ECNNEEHE--------------------------AERIAGEIIAH------KLVNK---T 339

Query: 372 QAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQ 431
           Q KD  +L R    + L+       +  YK+S  G   F       IKDL++  R +++ 
Sbjct: 340 QYKDYAILYRGNHQSRLLEKALMQNRIPYKLS--GGTSFF--SRPEIKDLLSYLRLLVNP 395

Query: 432 EDDLSFVCMLKSP--------------LFNFSEDDIFKICTQ----RHETETVYEYIQKF 473
           +DD +F+ ++ +P              L       +F         +  +   YE +Q+F
Sbjct: 396 DDDAAFLRIVNTPKREIGPATLEKLGELAMERNKSLFTASFDMGLLQTLSGRGYESLQRF 455

Query: 474 ANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKG----RQQFISRFGNE----- 524
                        ++ E+  +A+   P +    ++          +   S    E     
Sbjct: 456 -----------TDWLVEIRRLAERSEPIEAVRSLIEDIDYENWLYETSPSPKAAEMRMKN 504

Query: 525 VIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLE 584
           V  +   F      +E++   +L ++++ L       +       ++V++MT+H +KGLE
Sbjct: 505 VNTLFSWFKEMLEGDEEDEPMTLTQVVTRLTLRDMLERGEDEEELDQVQLMTLHASKGLE 564

Query: 585 SPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQ 644
            P VF+V     +  H+         S+ +D              N+             
Sbjct: 565 FPYVFIVGMEEGILPHQ--------SSIEED--------------NV------------- 589

Query: 645 EEYNRLLYVGMTRASDQL--IICK 666
           EE  RL YVG+TRA  +L   +CK
Sbjct: 590 EEERRLAYVGITRAQKELTFTLCK 613