RPSBLAST alignment for GI: peg_410 and conserved domain: TIGR01073

>gnl|CDD|162191 TIGR01073, pcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. Length = 726
 Score =  146 bits (369), Expect = 4e-35
 Identities = 137/552 (24%), Positives = 217/552 (39%), Gaps = 136/552 (24%)

Query: 135 AHYEEAKKKNCVLDFEDLIINTNDLLKKR-DVSAWIRYKIDQEINHILIDEVQDTSLIQW 193
             Y++   +N  LDF+DLI+ T +L ++  DV  + + K      +I +DE QDT+  Q+
Sbjct: 171 QEYQKRLLRNNALDFDDLIMTTINLFQRVPDVLEYYQRKF----QYIHVDEYQDTNRAQY 226

Query: 194 EVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQ 253
            ++R L   F          R L  VGD  QSIY + GA+ + +L      +K   NA  
Sbjct: 227 TLVRLLASRF----------RNLCVVGDADQSIYGWRGADIQNILS----FEKDYPNA-- 270

Query: 254 KFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQ 313
             + I L  ++RST +IL   ++V                 I H S+R  +     LW +
Sbjct: 271 --TTILLEQNYRSTKNILQAANEV-----------------IEHNSNRKPK----NLWTE 307

Query: 314 VVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQA 373
                    N   +  T Y+++  +   A  +A  I          D +  NG+++    
Sbjct: 308 ---------NSSGDKIT-YYEADTERDEAQFVAGEI----------DKLVKNGERK---Y 344

Query: 374 KDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQED 433
            D  +L R    +    F    LK +    +VG  +F   D   IKD++A  R I + +D
Sbjct: 345 GDFAILYRTNAQSR--VFEETLLKANIPYKIVGGLKFY--DRKEIKDILAYLRVIANPDD 400

Query: 434 DLSFVCMLKSPLFNFSEDDIFKICTQRHETETVY-------EYIQKFANCGISKFQHVIK 486
           DLS + ++  P        + KI     E            + I   A    +       
Sbjct: 401 DLSLLRIINVPKRGIGASSLEKIVNYALELNISLFEAIGEIDEIGGLAAKSANALLAFAT 460

Query: 487 YIHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEV----IDVLDEFLNFTLRNEQN 542
            I  L    ++ SP +    +L  K G ++ +     E     ++ LDEFL+ T   E  
Sbjct: 461 MIENLRQQQEYLSPTELVEEVL-DKSGYREMLKAEKTEEAQSRLENLDEFLSVTKEFEDE 519

Query: 543 S----------YSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVD 592
           S            +   L+S+L++         +     V +MT+H AKGLE PVVFL+ 
Sbjct: 520 SEDKSLIDFLTDLA---LVSDLDELE------ETEEGGAVTLMTLHAAKGLEFPVVFLIG 570

Query: 593 TGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLY 652
               VF H          SL D+  +                          EE  RL Y
Sbjct: 571 MEEGVFPH--------SRSLMDEKEL--------------------------EEERRLAY 596

Query: 653 VGMTRASDQLII 664
           VG+TRA ++L +
Sbjct: 597 VGITRAEEELYL 608