RPSBLAST alignment for GI: peg_410 and conserved domain: TIGR01073
>gnl|CDD|162191 TIGR01073, pcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. Length = 726
Score = 146 bits (369), Expect = 4e-35
Identities = 137/552 (24%), Positives = 217/552 (39%), Gaps = 136/552 (24%)
Query: 135 AHYEEAKKKNCVLDFEDLIINTNDLLKKR-DVSAWIRYKIDQEINHILIDEVQDTSLIQW 193
Y++ +N LDF+DLI+ T +L ++ DV + + K +I +DE QDT+ Q+
Sbjct: 171 QEYQKRLLRNNALDFDDLIMTTINLFQRVPDVLEYYQRKF----QYIHVDEYQDTNRAQY 226
Query: 194 EVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQ 253
++R L F R L VGD QSIY + GA+ + +L +K NA
Sbjct: 227 TLVRLLASRF----------RNLCVVGDADQSIYGWRGADIQNILS----FEKDYPNA-- 270
Query: 254 KFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQ 313
+ I L ++RST +IL ++V I H S+R + LW +
Sbjct: 271 --TTILLEQNYRSTKNILQAANEV-----------------IEHNSNRKPK----NLWTE 307
Query: 314 VVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQA 373
N + T Y+++ + A +A I D + NG+++
Sbjct: 308 ---------NSSGDKIT-YYEADTERDEAQFVAGEI----------DKLVKNGERK---Y 344
Query: 374 KDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQED 433
D +L R + F LK + +VG +F D IKD++A R I + +D
Sbjct: 345 GDFAILYRTNAQSR--VFEETLLKANIPYKIVGGLKFY--DRKEIKDILAYLRVIANPDD 400
Query: 434 DLSFVCMLKSPLFNFSEDDIFKICTQRHETETVY-------EYIQKFANCGISKFQHVIK 486
DLS + ++ P + KI E + I A +
Sbjct: 401 DLSLLRIINVPKRGIGASSLEKIVNYALELNISLFEAIGEIDEIGGLAAKSANALLAFAT 460
Query: 487 YIHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEV----IDVLDEFLNFTLRNEQN 542
I L ++ SP + +L K G ++ + E ++ LDEFL+ T E
Sbjct: 461 MIENLRQQQEYLSPTELVEEVL-DKSGYREMLKAEKTEEAQSRLENLDEFLSVTKEFEDE 519
Query: 543 S----------YSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVD 592
S + L+S+L++ + V +MT+H AKGLE PVVFL+
Sbjct: 520 SEDKSLIDFLTDLA---LVSDLDELE------ETEEGGAVTLMTLHAAKGLEFPVVFLIG 570
Query: 593 TGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLY 652
VF H SL D+ + EE RL Y
Sbjct: 571 MEEGVFPH--------SRSLMDEKEL--------------------------EEERRLAY 596
Query: 653 VGMTRASDQLII 664
VG+TRA ++L +
Sbjct: 597 VGITRAEEELYL 608