RPSBLAST alignment for GI: peg_410 and conserved domain: COG1074

>gnl|CDD|31272 COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]. Length = 1139
 Score =  369 bits (949), Expect = e-102
 Identities = 200/906 (22%), Positives = 344/906 (37%), Gaps = 82/906 (9%)

Query: 68   LLSSFFLTQKFTPQKNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASL 127
            L   FF  +     K           P L  + ++ ++  +   +     ++     A L
Sbjct: 279  LEKIFFQKKLKKKTKEAKLLAR----PPLHAEFEEIENRILLADELL---RLAPRLRALL 331

Query: 128  TLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQD 187
             L + L   Y+  K++   LDF+DLI     LL        +   + ++  HILIDE QD
Sbjct: 332  KLLEELIERYDAEKRQRNALDFDDLIHRLAKLLTSEG--EELAESLREQYPHILIDEFQD 389

Query: 188  TSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKR 247
            T   QW ++  L   F  G       RTLF VGD KQSIY F GA+    L      +  
Sbjct: 390  TDPQQWRILSRLFAGFKAGN------RTLFLVGDPKQSIYRFRGADIFTFLEAASSEKA- 442

Query: 248  ATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGT 307
                   F+ I L  ++RST ++L  V+ +F     A     D    +    +R G  G+
Sbjct: 443  -------FARITLETNYRSTPELLNAVNALFKQAMFAYPGEIDYDP-VAELGARNGSPGS 494

Query: 308  VQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGK 367
            V        +       +++ WT+  +   +   A + AR+IA  +  +I  + +    +
Sbjct: 495  VNGEPLPALK----FWEEEDDWTAPENEEDEREIADLEARQIAAWLRELIEGEAVLDGER 550

Query: 368  KRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRF 427
               I+A DI VLVR R +   I    R LK    I V  ++R  L + L  +DL+AL R 
Sbjct: 551  P--IRAGDIAVLVRSRNEAAAIE---RALKKAGIIPVYLSNRSSLFETLEAQDLLALLRA 605

Query: 428  ILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKY 487
            IL+ EDDL    +L+SPLF  +EDD+  +     E E ++E +++ A+  I +F+ V+  
Sbjct: 606  ILNPEDDLPLAALLRSPLFGLTEDDLAALAQDEAEWEFLWENLRQLAD--IWRFRGVLAM 663

Query: 488  IHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEVIDVLDEFLNFTLRNEQNSYSSL 547
               L   A+    HD     L +    ++ +   G    ++L E L   L  E      L
Sbjct: 664  WRAL---AKITPLHDLIAERLLSTNLGERDL-TNGLHAQELLQELLTRALSYEHGLLRWL 719

Query: 548  QELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMH 607
            +  I+ +E       R   ++ + VRIMT+H +KGLE P+VFL    S+ F+   +  + 
Sbjct: 720  ERFIALIENNDEEQARRLESDRDLVRIMTIHKSKGLEFPIVFLPFILSKRFNDSDVPLLV 779

Query: 608  IMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIIC-- 665
                  D     ++               +  ++    E  RLLYV +TRA +QLI+   
Sbjct: 780  YY----DGLRFELFDDLKSYPTPESQANKELAEEEALAEELRLLYVALTRAKEQLILIGA 835

Query: 666  ----KHSNTSNEKKSNQR-------TWYDMVYDSFHNDERVKKIK--------LTNSINK 706
                + S+        QR        W  ++  +    + V + +             + 
Sbjct: 836  PSKREKSSALAPLDLGQRVQVGGTQDWEGLLAIALKLSDPVLEEEALGAKESPQPPRADL 895

Query: 707  DEWIAYEWSTHHPENTPLEREETIKQLMDEQKIPKKLFSPIKNDINEPYILNPSTIDTKG 766
             EW         P           +   D              ++  P   + +  +   
Sbjct: 896  LEWARVFRRLKEPLWRVTSFSSLQQGEQDAYPRLDARQEASVKELPRPLSESGTPHEFPK 955

Query: 767  KTNLESLLSD---NQTFN-------RGLIIHKLLQVIFTLPEHKRKNFITSYCTKNAKLW 816
              +  +LL     N  F+        G  IH+LLQ +    + ++           +   
Sbjct: 956  GKSFGTLLHSVLENLDFSAPVDAAEIGTAIHELLQHLPFEEDWEQ-ELAEWLEAMLSTPL 1014

Query: 817  PAKEYKNLLLSITRLLENPMMTTAMSCDSYSEVSVSGKINCPKKDIIISGRIDQISISQQ 876
               E   +L  I     +P +      +S    S+   ++   +  ++ G ID +   + 
Sbjct: 1015 EDAERAIILSQILAFFRDPELEFLFPINS-RPFSLLDPLSAGSERGLLQGIIDLLFRHEG 1073

Query: 877  NIFIFEYKTHHHVPQEIEHIPYTHIA------QLSIYEKILKDSYPNKSLVCLLIYVSEP 930
              +I +YKT+        + P   +       QL +Y + L      +     L      
Sbjct: 1074 RYYILDYKTNRLGDDSAAYSPAEAMLKQRYDLQLQLYAEALHRILRKRVKDYALARHFGG 1133

Query: 931  KVFIIP 936
             +++  
Sbjct: 1134 VLYLFL 1139