RPSBLAST alignment of GI: peg_410 and protein with PDBid: 1pjr

>1pjr_A PCRA; DNA repair, DNA replication, SOS response, helicase, ATP- binding, DNA-binding; 2.50A {Geobacillus stearothermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1qhg_A* 3pjr_A* 2pjr_A* 1qhh_B* 1qhh_D* 1qhh_A* 1qhh_C* 2pjr_B* Length = 724

 Score =  146 bits (369), Expect = 2e-35
 Identities = 125/601 (20%), Positives = 228/601 (37%), Gaps = 119/601 (19%)

Query: 81  QKNIITQEINKKSPDLKE-KLKKSQDEFIKIRDRFNTYKMFKSTLASLT--LAKYLNAHY 137
           Q +++   + +K+ D K+ + +         ++     + F    ++    +   +   Y
Sbjct: 121 QLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRASTYYEKVVSDVYQEY 180

Query: 138 EEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIR 197
           ++   +N  LDF+DLI+ T  L  +      + +    +  +I IDE QDT+  Q+ +++
Sbjct: 181 QQRLLRNHSLDFDDLIMTTIQLFDRVP---DVLHYYQYKFQYIHIDEYQDTNRAQYTLVK 237

Query: 198 SLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSI 257
            L E F          + + AVGD  QSIY + GA+ + +L  +R              +
Sbjct: 238 KLAERF----------QNICAVGDADQSIYRWRGADIQNILSFER--------DYPNAKV 279

Query: 258 IELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQ 317
           I L  ++RST  IL   ++V                 I H  +R  +    +  E     
Sbjct: 280 ILLEQNYRSTKRILQAANEV-----------------IEHNVNRKPKRIWTENPEGKPIL 322

Query: 318 HDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDIL 377
           +    N   E                  A+ +A  I   +         ++   + +D  
Sbjct: 323 YYEAMNEADE------------------AQFVAGRIREAV---------ERGERRYRDFA 355

Query: 378 VLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSF 437
           VL R    + ++      LK +    +VG  +F   D   IKD++A  R I + +DDLS 
Sbjct: 356 VLYRTNAQSRVME--EMLLKANIPYQIVGGLKFY--DRKEIKDILAYLRVIANPDDDLSL 411

Query: 438 VCMLKSPLFNFSEDDIFKICTQ-RHETETVYEYIQKFANCGIS-----KFQHVIKYIHEL 491
           + ++  P        I K+         +++E + +    G+              + + 
Sbjct: 412 LRIINVPKRGIGASTIDKLVRYAADHELSLFEALGELEMIGLGAKAAGALAAFRSQLEQW 471

Query: 492 IHIAQFCSPHDFFTLILGAKKGRQQFISR---FGNEVIDVLDEFLNFTLRNEQ-NSYSSL 547
             + ++ S  +    +L     R+   +         ++ LDEFL+ T   E  +   SL
Sbjct: 472 TQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSL 531

Query: 548 QELISELEQYPPTIKRA---HSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIK 604
              +++L       +      +A  + V +MT+H AKGLE PVVFL+     +F H    
Sbjct: 532 IAFLTDLALISDLDELDGTEQAAEGDAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNR-- 589

Query: 605 KMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLII 664
                 SL DD  +                          EE  RL YVG+TRA ++L++
Sbjct: 590 ------SLEDDDEM--------------------------EEERRLAYVGITRAEEELVL 617

Query: 665 C 665
            
Sbjct: 618 T 618