RPSBLAST alignment of GI: peg_410 and protein with PDBid: 1uaa
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 Length = 673
Score = 112 bits (280), Expect = 4e-25
Identities = 96/598 (16%), Positives = 182/598 (30%), Gaps = 121/598 (20%)
Query: 82 KNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASLTLAKYLNAHYEEAK 141
K + I L++ + + ++ + Y Y+
Sbjct: 118 KELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCY--GLYDAHL 175
Query: 142 KKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTE 201
K VLDF+DLI+ LL+ + +R + +I ++L+DE QDT+ Q+
Sbjct: 176 KACNVLDFDDLILLPTLLLQANE---EVRKRWQNKIRYLLVDEYQDTNTSQY-------- 224
Query: 202 DFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELP 261
+ K S VGD+ QSIYS+ GA P N + +I+L
Sbjct: 225 --ELVKLLVGSRARFTVVGDDDQSIYSWRGARP--------QNLVLLSQDFPALKVIKLE 274
Query: 262 LSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQ 321
++RS+ IL + + I + + +L + S
Sbjct: 275 QNYRSSGRILKAANIL-----------------IANNPHVFEKRLFSELGYGAELKVLSA 317
Query: 322 CNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVR 381
N + E+ + + ++ Q KD +L R
Sbjct: 318 NNEEHEAERVTGE---------------------------LIAHHFVNKTQYKDYAILYR 350
Query: 382 KRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCML 441
+ + ++N + G F IKDL+A R + + +DD +F+ ++
Sbjct: 351 GNHQSRVFE--KFLMQNRIPYKISGGTSFF--SRPEIKDLLAYLRVLTNPDDDSAFLRIV 406
Query: 442 KSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKYIHELIHIAQFCSPH 501
+P + K+ + + + H
Sbjct: 407 NTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRL 466
Query: 502 DFFTLI---------------LGAKKGRQQFISRFGNEVIDVLDEFLNFTLRNEQNSYSS 546
I L + V + +E + +
Sbjct: 467 AEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMT 526
Query: 547 LQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKM 606
L ++++ + ++V++MT+H +KGLE P V++V H+
Sbjct: 527 LTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQ----- 581
Query: 607 HIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLII 664
+ + +E RL YVG+TRA +L
Sbjct: 582 ------------------------------SSIDEDNIDEERRLAYVGITRAQKELTF 609