RPSBLAST alignment of GI: peg_410 and protein with PDBid: 1w36

>1w36_B RECB, exodeoxyribonuclease V beta chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.24 PDB: 3k70_B* Length = 1180
 Score =  163 bits (412), Expect = 2e-40
 Identities = 129/873 (14%), Positives = 278/873 (31%), Gaps = 114/873 (13%)

Query: 96   LKEKLKKSQDEFIKIRDRFNTYKMFKSTLASLTLAKYLNAHYEEAKKKNCVLDFEDLIIN 155
             K   +  +    +  D+     +    L        +       K++   L F+D++  
Sbjct: 298  TKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSR 357

Query: 156  TNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVGKNTHSSPRT 215
             +    + +    +   I       +IDE QDT   Q+ + R +          H     
Sbjct: 358  LDSA-LRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWH--------HQPETA 408

Query: 216  LFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVD 275
            L  +GD KQ+IY+F GA+    ++ +                  L  ++RS   ++  V+
Sbjct: 409  LLLIGDPKQAIYAFRGADIFTYMKARSEVHAH----------YTLDTNWRSAPGMVNSVN 458

Query: 276  KVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDS 335
            K+FS  ++A    E     ++               + +      +  P  + W    +S
Sbjct: 459  KLFSQTDDAFMFREIPFIPVKSAGK----------NQALRFVFKGETQPAMKMWLMEGES 508

Query: 336  LPQESSASILARRIAYTISNMI-----GTDTIFSNGKKRVIQAKDILVLVRKRKDTPLIT 390
                   S +A+  A  I + +     G   + +    R ++A DI VLVR R++   + 
Sbjct: 509  CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVR 568

Query: 391  FLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCMLKSPLFNFSE 450
                 L+      V  ++R  + + L  ++++ L + +++ E + +    L + +   + 
Sbjct: 569  DALTLLEIPS---VYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNA 625

Query: 451  DDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGA 510
             DI  +    H  + V E    +          + +    +  +    S  +    +L  
Sbjct: 626  LDIETLNNDEHAWDVVVEEFDGYRQ--------IWRKRGVMPMLRALMSARNIAENLLAT 677

Query: 511  KKGRQQFISRFGNEVIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHN 570
              G ++         I  L +     L +E      L + I E +    + +    ++ +
Sbjct: 678  AGGERRLTDI---LHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKH 734

Query: 571  EVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNN 630
             V+I+T+H +KGLE P+V+L    +     +           +D       +       N
Sbjct: 735  LVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAF--------YHDRHSFEAVLD-----LN 781

Query: 631  IVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLII--CKHSNTSNEKKSNQRTWYDMVYDS 688
               + +   +     E  RLLYV +TR+     +          +KK +       +   
Sbjct: 782  AAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRL 841

Query: 689  FHNDERVKKIKLTNSINKDEWIAYEWSTHH-PENTPLEREETIKQLMDEQKIPKKLFSPI 747
                E      L   I         W T    +N P +  +     ++ + + +      
Sbjct: 842  LQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNW 901

Query: 748  K-----------NDINEPYILNPSTIDTKGKTNLESLLSDNQTF----NRGLIIHKLLQV 792
            +           + I +  +           + +E        F    + G  +H L + 
Sbjct: 902  RVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFED 961

Query: 793  I-FTLPEHKR-----------------------KNFITSYCTKNAKLWPAKEYKNLLLSI 828
            + FT P                              + +   +          +N  + +
Sbjct: 962  LDFTQPVDPNWVREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEM 1021

Query: 829  TRLLENPMMTTAMSCDSYSEVSVSGKINCPKKD-----IIISGRIDQISISQQNIFIFEY 883
               L       A   D+           CP  +      ++ G ID +   +   ++ +Y
Sbjct: 1022 EFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDY 1081

Query: 884  KTHHHVPQEIEHIPYTHIAQLSIYEKILKDSYP 916
            K+ + + ++     YT  A   +   +    Y 
Sbjct: 1082 KS-NWLGEDSSA--YTQQA---MAAAMQAHRYD 1108