RPSBLAST alignment of GI: peg_410 and SCOP domain: d1pjra1

Alignment
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Length = 318
 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 129 LAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDT 188
           +   +   Y++   +N  LDF+DLI+ T  L  +      + +    +  +I IDE QDT
Sbjct: 172 VVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVP---DVLHYYQYKFQYIHIDEYQDT 228

Query: 189 SLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRA 248
           +  Q+ +++ L              + + AVGD  QSIY + GA+ + +L  +R      
Sbjct: 229 NRAQYTLVKKL----------AERFQNICAVGDADQSIYRWRGADIQNILSFERDYPNAK 278

Query: 249 TNAGQKFSIIELPLSFRSTADILTVVDKVFS 279
                    I L  ++RST  IL   ++V  
Sbjct: 279 V--------ILLEQNYRSTKRILQAANEVIE 301

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: DEXX box DNA helicase
species: Bacillus stearothermophilus, PcrA [TaxId: 1422]