Query 537021.9.peg.414_1
Match_columns 45
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Tue May 24 19:07:23 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_414.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i25_A Huwentoxin-II, HWTX-II; 12.3 43 0.0018 15.8 0.3 22 2-23 12-33 (37)
2 2edn_A Myosin-binding protein 11.6 98 0.0041 13.9 2.8 22 2-23 91-112 (118)
3 2jjs_C Leukocyte surface antig 11.1 1E+02 0.0043 13.8 2.4 22 4-25 92-113 (127)
4 1pko_A Myelin oligodendrocyte 8.3 1.3E+02 0.0056 13.2 2.4 22 2-23 96-117 (139)
5 2xcy_A Extracellular sialidase 7.5 1.4E+02 0.0061 13.0 2.7 18 6-23 338-355 (386)
6 2pkd_A SLAM family member 5; s 6.7 1.6E+02 0.0067 12.8 2.5 22 3-24 84-105 (111)
7 3cx2_A Myosin-binding protein 6.2 1.7E+02 0.0071 12.7 2.6 22 3-24 84-105 (108)
8 2bf6_A Sialidase, EXO-alpha-si 5.8 1.8E+02 0.0075 12.6 2.4 17 6-22 413-429 (449)
9 2ptt_B Natural killer cell rec 4.7 2.1E+02 0.0089 12.2 2.5 21 3-24 87-107 (112)
10 1bdf_A RNA polymerase alpha su 4.6 2E+02 0.0086 12.3 0.9 13 27-39 223-235 (235)
No 1
>1i25_A Huwentoxin-II, HWTX-II; neurotoxin, insecticidal toxin, disulfide bonds; NMR {Ornithoctonus huwena} SCOP: g.3.6.2
Probab=12.30 E-value=43 Score=15.81 Aligned_cols=22 Identities=36% Similarity=0.717 Sum_probs=18.0
Q ss_pred CCCCEEEEEEECCCCEEEEEEE
Q ss_conf 8761026877216814687635
Q 537021.9.peg.4 2 SEGYYPCKVNLENGELNCIFEF 23 (45)
Q Consensus 2 segyypckvnlengelncifef 23 (45)
.||--|||-+--.|...|-|.|
T Consensus 12 k~g~kpck~kk~kggwkckfn~ 33 (37)
T 1i25_A 12 KEGDKPCKKKKCKGGWKCKFNM 33 (37)
T ss_dssp BCSSSBCBCCCCCTTEEECSSC
T ss_pred CCCCCCCCCCCCCCCCEEEEEE
T ss_conf 1678888766688773676768
No 2
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=11.61 E-value=98 Score=13.94 Aligned_cols=22 Identities=27% Similarity=0.561 Sum_probs=18.6
Q ss_pred CCCCEEEEEEECCCCEEEEEEE
Q ss_conf 8761026877216814687635
Q 537021.9.peg.4 2 SEGYYPCKVNLENGELNCIFEF 23 (45)
Q Consensus 2 segyypckvnlengelncifef 23 (45)
..|.|-|.+.-..|+-.|-|..
T Consensus 91 D~G~Y~C~asN~~G~~~~~~~L 112 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNI 112 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECC
T ss_pred HCEEEEEEEEECCCCEEEEEEE
T ss_conf 0989999999899868999899
No 3
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=11.09 E-value=1e+02 Score=13.84 Aligned_cols=22 Identities=32% Similarity=0.613 Sum_probs=17.5
Q ss_pred CCEEEEEEECCCCEEEEEEEHH
Q ss_conf 6102687721681468763569
Q 537021.9.peg.4 4 GYYPCKVNLENGELNCIFEFQF 25 (45)
Q Consensus 4 gyypckvnlengelncifefqf 25 (45)
|-|-|.|...+.+-.-+.+.|.
T Consensus 92 G~Y~C~V~~~~~~~e~~v~Lq~ 113 (127)
T 2jjs_C 92 GNYTCEVTELTREGETIIELKY 113 (127)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEEEECCCEEEEEEEEEE
T ss_conf 7099999989940689999999
No 4
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=8.27 E-value=1.3e+02 Score=13.24 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=14.7
Q ss_pred CCCCEEEEEEECCCCEEEEEEE
Q ss_conf 8761026877216814687635
Q 537021.9.peg.4 2 SEGYYPCKVNLENGELNCIFEF 23 (45)
Q Consensus 2 segyypckvnlengelncifef 23 (45)
.+|.|-|.|.-.++.-....+.
T Consensus 96 D~G~Y~C~v~~~~~~~~~~v~L 117 (139)
T 1pko_A 96 DEGGYTCFFRDHSYQEEAAVEL 117 (139)
T ss_dssp GCEEEEEEEEETTEEEEEEEEE
T ss_pred HCCEEEEEEEECCCEEEEEEEE
T ss_conf 9939999999789769999999
No 5
>2xcy_A Extracellular sialidase/neuraminidase, putative; hydrolase, glycosidase; 1.84A {Aspergillus fumigatus}
Probab=7.48 E-value=1.4e+02 Score=13.05 Aligned_cols=18 Identities=11% Similarity=0.231 Sum_probs=16.1
Q ss_pred EEEEEEECCCCEEEEEEE
Q ss_conf 026877216814687635
Q 537021.9.peg.4 6 YPCKVNLENGELNCIFEF 23 (45)
Q Consensus 6 ypckvnlengelncifef 23 (45)
|||-+.+.+|++.++||-
T Consensus 338 Ys~l~~~~dg~i~vlYE~ 355 (386)
T 2xcy_A 338 YSSMTKTGDYKIGALVES 355 (386)
T ss_dssp EEEEEECTTSCEEEEEEE
T ss_pred CCEEEECCCCEEEEEEEC
T ss_conf 883499389959999983
No 6
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=6.69 E-value=1.6e+02 Score=12.83 Aligned_cols=22 Identities=14% Similarity=0.318 Sum_probs=15.9
Q ss_pred CCCEEEEEEECCCCEEEEEEEH
Q ss_conf 7610268772168146876356
Q 537021.9.peg.4 3 EGYYPCKVNLENGELNCIFEFQ 24 (45)
Q Consensus 3 egyypckvnlengelncifefq 24 (45)
+|-|-|.|..+++......+|+
T Consensus 84 sG~Y~C~v~~~~~~~~~~~~~~ 105 (111)
T 2pkd_A 84 AGDYKADINTQADPYTTTKRYN 105 (111)
T ss_dssp CEEEEEEEEESSTTSEEEEEEE
T ss_pred CEEEEEEEEECCCCCEEEEEEE
T ss_conf 9779999997389958999999
No 7
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=6.24 E-value=1.7e+02 Score=12.69 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=17.5
Q ss_pred CCCEEEEEEECCCCEEEEEEEH
Q ss_conf 7610268772168146876356
Q 537021.9.peg.4 3 EGYYPCKVNLENGELNCIFEFQ 24 (45)
Q Consensus 3 egyypckvnlengelncifefq 24 (45)
.|-|-|.+.-+.|+-.|-+..+
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~ 105 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLT 105 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEE
T ss_pred CEEEEEEEEECCCEEEEEEEEE
T ss_conf 9789999998998699999999
No 8
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=5.84 E-value=1.8e+02 Score=12.57 Aligned_cols=17 Identities=35% Similarity=0.925 Sum_probs=14.5
Q ss_pred EEEEEEECCCCEEEEEE
Q ss_conf 02687721681468763
Q 537021.9.peg.4 6 YPCKVNLENGELNCIFE 22 (45)
Q Consensus 6 ypckvnlengelncife 22 (45)
|||-+.+.+|.+-|+||
T Consensus 413 Ys~~~~~~dg~i~~~yE 429 (449)
T 2bf6_A 413 YSCLTELSNGNIGLLYE 429 (449)
T ss_dssp CEEEEECTTSCEEEEEC
T ss_pred CCEEEECCCCEEEEEEE
T ss_conf 87058979997999998
No 9
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=4.74 E-value=2.1e+02 Score=12.17 Aligned_cols=21 Identities=29% Similarity=0.577 Sum_probs=16.0
Q ss_pred CCCEEEEEEECCCCEEEEEEEH
Q ss_conf 7610268772168146876356
Q 537021.9.peg.4 3 EGYYPCKVNLENGELNCIFEFQ 24 (45)
Q Consensus 3 egyypckvnlengelncifefq 24 (45)
.|.|-|.|.-++|+. +...|+
T Consensus 87 sG~Y~c~v~~~~~~~-~~~~~~ 107 (112)
T 2ptt_B 87 SGHYLLEITNTGGKV-CNKNFQ 107 (112)
T ss_dssp CEEEEEEEECTTCBE-EEEEEE
T ss_pred CEEEEEEEEECCCEE-EEEEEE
T ss_conf 869999999799949-999999
No 10
>1bdf_A RNA polymerase alpha subunit; nucleotidyltransferase, assemble; 2.50A {Escherichia coli} SCOP: d.74.3.1 d.181.1.1
Probab=4.56 E-value=2e+02 Score=12.26 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCE
Q ss_conf 9999998721301
Q 537021.9.peg.4 27 ILKKLFDIFGNLR 39 (45)
Q Consensus 27 ilkklfdifgnlr 39 (45)
||.+.|+.|.|+|
T Consensus 223 iL~~~f~~f~~~~ 235 (235)
T 1bdf_A 223 ILAEQLEAFVDLR 235 (235)
T ss_dssp HHHHHGGGGC---
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999875379
Done!