HHsearch alignment for GI: peg_42 and conserved domain: PRK00465
>PRK00465 rpmJ 50S ribosomal protein L36; Reviewed.
Probab=99.69 E-value=1.4e-17 Score=109.33 Aligned_cols=37 Identities=43% Similarity=0.691 Sum_probs=35.5
Q ss_pred EEEHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCHHHCCC
Q ss_conf 97458899885016787099988889999877975232079
Q 537021.9.peg.4 4 VKVRNSLRVLKLRHRGNKVVRRKNVIRIVNKLNPRFKVRQG 44 (44)
Q Consensus 4 MKvr~Slk~lk~r~~~c~~VrRkGrvyVick~nPrhK~RQG 44 (44)
T Consensus 1 MKVr~SVKk~C~---~CkvirR~g~v~ViC-~npkHKQRQG 37 (37)
T PRK00465 1 MKVRASVKKICE---KCKVIKRKGVVRVIC-ANPKHKQRQG 37 (37)
T ss_pred CCCHHHHHHHHH---CCEEEEECCEEEEEE-CCCCCHHCCC
T ss_conf 950367898741---177998478799996-8986200079