HHsearch results for GI: peg_42 and protein with PDBid: 3ofq_4
>3ofq_4 50S ribosomal protein L36; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_4 1p86_4 1vs8_4 1vs6_4 2aw4_4 2awb_4 1vt2_4 2i2v_4 2j28_4 2i2t_4* 2qao_4* 2qba_4* 2qbc_4* 2qbe_4 2qbg_4 2qbi_4* 2qbk_4* 2qov_4 2qox_4 2qoz_4* ...
Probab=99.73 E-value=4.4e-20 Score=120.84 Aligned_cols=38 Identities=42% Similarity=0.681 Sum_probs=35.7
Q ss_pred EEEHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCHHHCCC
Q ss_conf 97458899885016787099988889999877975232079
Q 537021.9.peg.4 4 VKVRNSLRVLKLRHRGNKVVRRKNVIRIVNKLNPRFKVRQG 44 (44)
Q Consensus 4 MKvr~Slk~lk~r~~~c~~VrRkGrvyVick~nPrhK~RQG 44 (44)
|||++|||+ +|.||++|+|+|++||||++|||||||||
T Consensus 1 MKVr~svKk---~C~~C~ivrR~Grv~ViCk~nPrhKQRQG 38 (38)
T 3ofq_4 1 MKVRASVKK---LCRNCKIVKRDGVIRVICSAEPKHKQRQG 38 (38)
T ss_dssp CBCCSCCCC---SSTTCCCEESSSSEEBCCSSCGGGCBCCC
T ss_pred CCCCHHHHH---HCCCCEEEEECCEEEEECCCCCCCCCCCC
T ss_conf 960134352---17897199866889999089986101278