Query 537021.9.peg.423_1
Match_columns 37
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Tue May 24 18:39:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_423.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n93x_ a.206.1.1 (X:) P40 nuc 30.6 13 0.00092 15.8 2.1 14 23-36 106-120 (343)
2 d1qz8a_ b.140.1.1 (A:) Replica 7.6 4.7 0.00034 18.0 -4.8 14 16-29 85-98 (111)
3 d2nmla1 d.330.1.1 (A:2-101) En 4.7 1E+02 0.0073 11.3 0.9 12 25-36 23-34 (100)
4 d1rk8b_ d.232.1.1 (B:) Mago na 4.0 1.1E+02 0.0084 11.0 1.6 14 13-26 117-130 (141)
5 d1rsoa_ a.194.1.1 (A:) Presyna 2.4 1.7E+02 0.013 10.1 1.2 12 26-37 27-38 (60)
6 d1iuya_ a.4.5.34 (A:) Cullin-3 2.1 2E+02 0.015 9.7 1.5 12 24-35 63-74 (92)
7 d1dq3a3 d.95.2.2 (A:129-226) P 2.1 77 0.0056 11.8 -2.2 17 14-30 8-24 (98)
8 d1ug7a_ a.24.24.1 (A:) Domain 1.9 2.3E+02 0.017 9.4 1.6 12 22-33 69-80 (128)
9 d1veja1 a.5.2.1 (A:8-68) 49314 1.8 2.4E+02 0.017 9.4 1.5 10 26-35 51-60 (61)
10 d2axla1 a.4.5.43 (A:1-144) Wer 1.8 1.8E+02 0.013 10.0 -0.6 23 13-35 18-40 (144)
No 1
>d1n93x_ a.206.1.1 (X:) P40 nucleoprotein {Borna disease virus [TaxId: 12455]}
Probab=30.64 E-value=13 Score=15.81 Aligned_cols=14 Identities=50% Similarity=0.954 Sum_probs=10.5
Q ss_pred HHHH-HHHHHHHHHH
Q ss_conf 9869-8999999841
Q 537021.9.peg.4 23 LLSI-NTCIDLLIGI 36 (37)
Q Consensus 23 llsi-ntcidlligi 36 (37)
+.|| +.|-||||||
T Consensus 106 ~sSil~hCCdLLIGi 120 (343)
T d1n93x_ 106 ISSIFSHCCSLLIGV 120 (343)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999988888754
No 2
>d1qz8a_ b.140.1.1 (A:) Replicase NSP9 {SARS coronavirus [TaxId: 227859]}
Probab=7.61 E-value=4.7 Score=18.01 Aligned_cols=14 Identities=43% Similarity=0.985 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999869899
Q 537021.9.peg.4 16 FLYFVQGLLSINTC 29 (37)
Q Consensus 16 flyfvqgllsintc 29 (37)
+||||+++-+++.-
T Consensus 85 YLYFvKnln~L~RG 98 (111)
T d1qz8a_ 85 YLYFIKGLNNLNRG 98 (111)
T ss_dssp EEEEBTTCCHHHHH
T ss_pred EEEEECCCCCCCCC
T ss_conf 99996166520010
No 3
>d2nmla1 d.330.1.1 (A:2-101) Enhancer of rudimentary homolog, ERH {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.70 E-value=1e+02 Score=11.26 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHH
Q ss_conf 698999999841
Q 537021.9.peg.4 25 SINTCIDLLIGI 36 (37)
Q Consensus 25 sintcidlligi 36 (37)
|+|.|+|-.-+|
T Consensus 23 Sv~~cmegiC~i 34 (100)
T d2nmla1 23 SVNECMEGVCKM 34 (100)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 499999999999
No 4
>d1rk8b_ d.232.1.1 (B:) Mago nashi protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=4.02 E-value=1.1e+02 Score=10.97 Aligned_cols=14 Identities=36% Similarity=0.626 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999869
Q 537021.9.peg.4 13 VLIFLYFVQGLLSI 26 (37)
Q Consensus 13 vliflyfvqgllsi 26 (37)
..+|-|+||.|-..
T Consensus 117 Lr~FyylvqDlkcl 130 (141)
T d1rk8b_ 117 LRCFYYLVQDLKCL 130 (141)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 78999999999999
No 5
>d1rsoa_ a.194.1.1 (A:) Presynaptic protein sap97 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=2.42 E-value=1.7e+02 Score=10.06 Aligned_cols=12 Identities=33% Similarity=0.733 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHC
Q ss_conf 989999998419
Q 537021.9.peg.4 26 INTCIDLLIGIF 37 (37)
Q Consensus 26 intcidlligif 37 (37)
..+.|+-+|+||
T Consensus 27 lr~~iervI~iF 38 (60)
T d1rsoa_ 27 LRSSIERVISIF 38 (60)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 6
>d1iuya_ a.4.5.34 (A:) Cullin-3 homologue {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.10 E-value=2e+02 Score=9.72 Aligned_cols=12 Identities=33% Similarity=0.362 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHH
Q ss_conf 869899999984
Q 537021.9.peg.4 24 LSINTCIDLLIG 35 (37)
Q Consensus 24 lsintcidllig 35 (37)
-.|..||+.||.
T Consensus 63 ~~iK~~Ie~LIe 74 (92)
T d1iuya_ 63 VVIKKRIEGLIE 74 (92)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999986
No 7
>d1dq3a3 d.95.2.2 (A:129-226) PI-Pfui intein {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=2.06 E-value=77 Score=11.84 Aligned_cols=17 Identities=29% Similarity=0.854 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999998698999
Q 537021.9.peg.4 14 LIFLYFVQGLLSINTCI 30 (37)
Q Consensus 14 liflyfvqgllsintci 30 (37)
+||-|+..|...-|.|+
T Consensus 8 fifDYWLAGFIAGdG~~ 24 (98)
T d1dq3a3 8 FIFDYWLAGFIAGDGCF 24 (98)
T ss_dssp CCHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHHCCCCCH
T ss_conf 24998877763378861
No 8
>d1ug7a_ a.24.24.1 (A:) Domain from hypothetical 2610208m17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=1.86 E-value=2.3e+02 Score=9.41 Aligned_cols=12 Identities=33% Similarity=0.623 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHH
Q ss_conf 998698999999
Q 537021.9.peg.4 22 GLLSINTCIDLL 33 (37)
Q Consensus 22 gllsintcidll 33 (37)
-+..|.||.+|-
T Consensus 69 ~l~kIAtCLelR 80 (128)
T d1ug7a_ 69 TIGKIATCLELR 80 (128)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 9
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=1.84 E-value=2.4e+02 Score=9.38 Aligned_cols=10 Identities=40% Similarity=0.973 Sum_probs=0.0
Q ss_pred HHHHHHHHHH
Q ss_conf 9899999984
Q 537021.9.peg.4 26 INTCIDLLIG 35 (37)
Q Consensus 26 intcidllig 35 (37)
+|..|++|+|
T Consensus 51 v~~Aie~Ll~ 60 (61)
T d1veja1 51 IHAAIEMLLG 60 (61)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
T ss_conf 9999999865
No 10
>d2axla1 a.4.5.43 (A:1-144) Werner syndrome ATP-dependent helicase WRN {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.84 E-value=1.8e+02 Score=9.95 Aligned_cols=23 Identities=22% Similarity=0.179 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999869899999984
Q 537021.9.peg.4 13 VLIFLYFVQGLLSINTCIDLLIG 35 (37)
Q Consensus 13 vliflyfvqgllsintcidllig 35 (37)
+|--.+-+.+-..++.|||.|.|
T Consensus 18 iLs~V~~~~~rfg~~~iidiL~G 40 (144)
T d2axla1 18 LLSAVDILGEKFGIGLPILFLRG 40 (144)
T ss_dssp HHHHHHHTTTCSCSHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 99999995462462189999985
Done!