HHsearch alignment for GI: peg_472 and conserved domain: COG0470
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair].
Probab=100.00 E-value=4.6e-42 Score=330.47 Aligned_cols=199 Identities=33% Similarity=0.483 Sum_probs=175.8
Q ss_pred CCCHHHHHHHHHHHHH-CCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 9284899999999998-287670620107879888899999999961468777886658789997799997798778222
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFK-SGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVE 79 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~-~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e 79 (369)
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~halL~~Gp~G~Gktt~a~~lA~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~d~le 78 (325)
T COG0470 3 LVPWQEAVKRLLVQALESGRLPHALLFYGPPGVGKTTAALALAKELLCENPTGL----LPCGHCRSCKLIPAGNHPDFLE 78 (325)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCC----CCCCHHHHHHHHCCCCCCCEEE
T ss_conf 433235899999999865888761003799999789999999999658664334----5520022444320256886599
Q ss_pred CCCCCCC----CHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH
Q ss_conf 4533223----345556655544565420465237751156648001678999997212211146650675433035675
Q 537021.9.peg.4 80 LDAASHT----SIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLS 155 (369)
Q Consensus 80 ~~~~s~~----~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~S 155 (369)
T Consensus 79 l~~s~~~~~~i~~~~vr~~~~~~~~~~~~~~~kviiidead~mt~~A~nallk~lEep~~~~~~il~~n~~~~il~tI~S 158 (325)
T COG0470 79 LNPSDLRKIDIIVEQVRELAEFLSESPLEGGYKVVIIDEADKLTEDAANALLKTLEEPPKNTRFILITNDPSKILPTIRS 158 (325)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHCHHHHHH
T ss_conf 77321333300699999999860446566772699973203269888876754332488871699974985556478775
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHH
Q ss_conf 433321024540013567876431013456256644565316764200110001110000
Q 537021.9.peg.4 156 RCQRFDLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARC 215 (369)
Q Consensus 156 Rcq~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~ 215 (369)
T Consensus 159 Rc~~i~f~~~~------~~~~i~~~e-----~~~l~~i~~~~~gd~r~~i~~lq-~~~~~ 206 (325)
T COG0470 159 RCQRIRFKPPS------RLEAIAWLE-----DQGLEEIAAVAEGDARKAINPLQ-ALAAL 206 (325)
T ss_pred HEEEEECCCCC------HHHHHHHHH-----HHHHHHHHHHHCCHHHHHCCHHH-HHHHC
T ss_conf 60788767741------889999850-----75799999870406887348999-99861