HHsearch alignment for GI: peg_472 and conserved domain: COG0703
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism].
Probab=96.20 E-value=0.026 Score=37.13 Aligned_cols=127 Identities=20% Similarity=0.211 Sum_probs=60.5
Q ss_pred EHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 2010787988889999999996146877788665878999779999779---8778222453322334555665554456
Q 537021.9.peg.4 24 YMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRG---NHVDVVELDAASHTSIDDVREIIDQIYY 100 (369)
Q Consensus 24 ~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~---~~~d~~e~~~~s~~~id~ir~l~~~~~~ 100 (369)
T Consensus 5 IvLiG~mGaGKSTIGr~LAk~L~~~F~D~D~-------------~Ie~~~g~sI~eIF~~~GE-----~~FR~~E~~vl~ 66 (172)
T COG0703 5 IVLIGFMGAGKSTIGRALAKALNLPFIDTDQ-------------EIEKRTGMSIAEIFEEEGE-----EGFRRLETEVLK 66 (172)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCHH-------------HHHHHHCCCHHHHHHHHHH-----HHHHHHHHHHHH
T ss_conf 8997179997768999999981998022469-------------9999979699999999828-----999999999999
Q ss_pred HHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHH-HHHHHHHH
Q ss_conf 54204652377511566480016789999972122111466506754330356754333210245400135-67876431
Q 537021.9.peg.4 101 KPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRFDLHRISIGDLI-ELFTKILQ 179 (369)
Q Consensus 101 ~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~~f~~l~~~~i~-~~L~~i~~ 179 (369)
T Consensus 67 ~l~~~~~~ViaTGGG~v~~~enr~~l~~-------~g~vv~L~~----~~e~l~~Rl~~~~~RPll~~~~~~~~l~~L~~ 135 (172)
T COG0703 67 ELLEEDNAVIATGGGAVLSEENRNLLKK-------RGIVVYLDA----PFETLYERLQRDRKRPLLQTEDPREELEELLE 135 (172)
T ss_pred HHHHCCCEEEECCCCCCCCHHHHHHHHH-------CCEEEEEEC----CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9862699599779861168999999984-------885899969----99999998234667986567776899999999