HHsearch alignment for GI: peg_472 and conserved domain: COG1219
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=98.42 E-value=1.6e-07 Score=75.53 Aligned_cols=108 Identities=28% Similarity=0.384 Sum_probs=67.9
Q ss_pred CCCHHHHHHHHHHHH-------HCC-C-----CCE-EEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 928489999999999-------828-7-----670-62010787988889999999996146877788665878999779
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAF-------KSG-R-----IAQ-SYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHC 66 (369)
Q Consensus 1 iiGq~~~~~~l~~~~-------~~~-~-----~~h-a~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c 66 (369)
T Consensus 63 VIGQe~AKKvLsVAVYNHYKRl~~~~~~~dvEL~KSNILLiGPTGsGKTlLAqTLAk~LnVPFaiADATtL--------- 133 (408)
T COG1219 63 VIGQEQAKKVLSVAVYNHYKRLNNKEDNDDVELSKSNILLIGPTGSGKTLLAQTLAKILNVPFAIADATTL--------- 133 (408)
T ss_pred EECCHHHHCEEEEEEEHHHHHHHCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCH---------
T ss_conf 32625431034664106889986048877635320317998889975779999999984898475144412---------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCEEEEECHHHCCCC--------------HHHHHHH
Q ss_conf 999779877822245332233455566----5554456542046523775115664800--------------1678999
Q 537021.9.peg.4 67 QAIIRGNHVDVVELDAASHTSIDDVRE----IIDQIYYKPISARFRVYIMDEVQMLSTA--------------AFNGLLK 128 (369)
Q Consensus 67 ~~i~~~~~~d~~e~~~~s~~~id~ir~----l~~~~~~~p~~~~~kv~iid~a~~m~~~--------------a~NaLLK 128 (369)
T Consensus 134 --TE------------AGYVG-EDVENillkLlqaadydV~rAerGIIyIDEIDKIarkSen~SITRDVSGEGVQQALLK 198 (408)
T COG1219 134 --TE------------AGYVG-EDVENILLKLLQAADYDVERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLK 198 (408)
T ss_pred --HH------------CCCCC-HHHHHHHHHHHHHCCCCHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf --10------------66355-0089999999987645888882885998510254205789872343673589999999
Q ss_pred HHHH
Q ss_conf 9972
Q 537021.9.peg.4 129 TLEE 132 (369)
Q Consensus 129 ~lEE 132 (369)
T Consensus 199 iiEG 202 (408)
T COG1219 199 IIEG 202 (408)
T ss_pred HHCC
T ss_conf 9707