HHsearch alignment for GI: peg_472 and conserved domain: COG1220

>COG1220 HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=96.95  E-value=0.00095  Score=47.79  Aligned_cols=46  Identities=30%  Similarity=0.512  Sum_probs=37.6

Q ss_pred             CCCHHHHHHH----HHHHHHCCC---------CCEEEHHCCCCCCCHHHHHHHHHHHHC
Q ss_conf             9284899999----999998287---------670620107879888899999999961
Q 537021.9.peg.4    1 MIGQKPMIKT----LTNAFKSGR---------IAQSYMLSGTRGIGKTTTARIIARSLN   46 (369)
Q Consensus         1 iiGq~~~~~~----l~~~~~~~~---------~~ha~lf~G~~G~GK~~~a~~~A~~l~   46 (369)
T Consensus        17 IIGQ~~AKkaVAIALRNR~RR~qL~~~lr~EV~PKNILMIGpTGVGKTEIARRLAkl~~   75 (444)
T COG1220          17 IIGQDEAKKAVAIALRNRWRRMQLEEELRDEVTPKNILMIGPTGVGKTEIARRLAKLAG   75 (444)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHC
T ss_conf             40717778899999998999975478776225755358888888768899999999848