HHsearch alignment for GI: peg_472 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=99.27  E-value=8.8e-11  Score=99.67  Aligned_cols=118  Identities=27%  Similarity=0.360  Sum_probs=96.5

Q ss_pred             CCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEEC------------CCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             52377511566480016789999972122111466506------------754330356754333210245400135678
Q 537021.9.peg.4  107 FRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATT------------EIRKIPITVLSRCQRFDLHRISIGDLIELF  174 (369)
Q Consensus       107 ~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~------------~~~~ll~TI~SRcq~~~f~~l~~~~i~~~L  174 (369)
T Consensus       292 pGVLFIDEvHmLDIE~FsFlnrAlEse~aP-Iii~AtNRG~~kiRGTd~~sPhGIP~DlLDRllII~t~py~~~EireIi  370 (450)
T COG1224         292 PGVLFIDEVHMLDIECFSFLNRALESELAP-IIILATNRGMTKIRGTDIESPHGIPLDLLDRLLIISTRPYSREEIREII  370 (450)
T ss_pred             CCEEEEECHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCCEEEECCCCCCCCCCCCHHHHHHEEEEECCCCCHHHHHHHH
T ss_conf             342897321345578999999876314675-7999717750012166776888898766622567744779889999999


Q ss_pred             HHHHHHCCCCCCHHHHHHHHHCC-CCCCCHHHHCCCCC--CCH--HHCCCCHHHHH
Q ss_conf             76431013456256644565316-76420011000111--000--00012103220
Q 537021.9.peg.4  175 TKILQEESIEFDPEAVAMIARAS-DGSARDGLSLLDQA--IAR--CNDKIVTSSVR  225 (369)
Q Consensus       175 ~~i~~~E~i~~d~~~l~~ia~~s-~GslR~Al~lLeq~--i~~--~~~~i~~e~v~  225 (369)
T Consensus       371 ~iRa~ee~i~l~~~Ale~L~~ig~etSLRYa~qLL~pa~iiA~~rg~~~V~~~dVe  426 (450)
T COG1224         371 RIRAKEEDIELSDDALEYLTDIGEETSLRYAVQLLTPASIIAKRRGSKRVEVEDVE  426 (450)
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHH
T ss_conf             97643540304888999997515034489999861688899987179746566799