HHsearch alignment for GI: peg_472 and conserved domain: COG1484
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=97.17 E-value=0.0023 Score=45.01 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 89999999999828767062010787988889999999996146877788665878999779999779877822245332
Q 537021.9.peg.4 5 KPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAAS 84 (369)
Q Consensus 5 ~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s 84 (369)
T Consensus 89 ~~~l~~~~~~~~~~~~~~nl~l~G~~G~GKthLa~Ai~~~l~-~~g~s------------------------v~f~---- 139 (254)
T COG1484 89 KKALEDLASLVEFFERGENLVLLGPPGVGKTHLAIAIGNELL-KAGIS------------------------VLFI---- 139 (254)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHH-HCCCE------------------------EEEE----
T ss_conf 999999999998732588289989999879999999999999-83984------------------------9998----
Q ss_pred CCCHHHHHHHHHHHH-------HHHHCCCCCEEEEECHHH--CCCCHHHHHHHHHHH
Q ss_conf 233455566555445-------654204652377511566--480016789999972
Q 537021.9.peg.4 85 HTSIDDVREIIDQIY-------YKPISARFRVYIMDEVQM--LSTAAFNGLLKTLEE 132 (369)
Q Consensus 85 ~~~id~ir~l~~~~~-------~~p~~~~~kv~iid~a~~--m~~~a~NaLLK~lEE 132 (369)
T Consensus 140 -~~~el~~~Lk~~~~~~~~~~~l~~~l~~~dlLIiDDlG~~~~~~~~~~~~~q~I~~ 195 (254)
T COG1484 140 -TAPDLLSKLKAAFDEGRLEEKLLRELKKVDLLIIDDIGYEPFSQEEADLLFQLISR 195 (254)
T ss_pred -EHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf -85999999999874552689999887528989982367766881558799999999