HHsearch alignment for GI: peg_472 and conserved domain: COG2812
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=666.71 Aligned_cols=344 Identities=44% Similarity=0.718 Sum_probs=324.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 92848999999999982876706201078798888999999999614687778866587899977999977987782224
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVEL 80 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~ 80 (369)
T Consensus 18 vvGQe~v~~~L~nal~~~ri~hAYlfsG~RGvGKTt~Ari~AkalNC~~~----~~~ePC~~C~~Ck~I~~g~~~DviEi 93 (515)
T COG2812 18 VVGQEHVVKTLSNALENGRIAHAYLFSGPRGVGKTTIARILAKALNCENG----PTAEPCGKCISCKEINEGSLIDVIEI 93 (515)
T ss_pred HCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC----CCCCCCHHHHHHHHHHCCCCCCCHHH
T ss_conf 63648999999999980842333651377776710499999999568898----77772253166686514886410113
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 53322334555665554456542046523775115664800167899999721221114665067543303567543332
Q 537021.9.peg.4 81 DAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRF 160 (369)
Q Consensus 81 ~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~ 160 (369)
T Consensus 94 DaASn~gVddiR~i~e~v~y~P~~~ryKVyiIDEvHMLS~~afNALLKTLEEPP~hV~FIlATTe~~Kip~TIlSRcq~f 173 (515)
T COG2812 94 DAASNTGVDDIREIIEKVNYAPSEGRYKVYIIDEVHMLSKQAFNALLKTLEEPPSHVKFILATTEPQKIPNTILSRCQRF 173 (515)
T ss_pred HHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCC
T ss_conf 64445486799999987246886666418998318764378888875111368667489985388676840455212202
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHH
Q ss_conf 10245400135678764310134562566445653167642001100011100000012103220001356777778888
Q 537021.9.peg.4 161 DLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMDLF 240 (369)
Q Consensus 161 ~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~Ll 240 (369)
T Consensus 174 ~fkri~~~~I~~~L~~i~~~E~I~~e~~aL~~ia~~a~Gs~RDalslLDq~i~~~~~~It~~~v~~~lG~~~~~~~~~~~ 253 (515)
T COG2812 174 DFKRLDLEEIAKHLAAILDKEGINIEEDALSLIARAAEGSLRDALSLLDQAIAFGEGEITLESVRDMLGLTDIEKLLSLL 253 (515)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 22579999999999999874487547999999999828974567778999997067765699999996887789999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 763013633467887654304762135787775348999999745-7412234499889999999986299899999999
Q 537021.9.peg.4 241 GYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYI-PEMADTLLYSEAENARALQYSKEVSITFLSRFWQ 319 (369)
Q Consensus 241 ~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~-~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq 319 (369)
T Consensus 254 ~~i~~~d~~~~~~~~~~l~~~G~~~~~~l~dl~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~l~~~~~ 331 (515)
T COG2812 254 EAILKGDAKEALRLINELIEEGKDPEAFLEDLLNFLRDLLLFKQTVPNELQLNTT--EIEERTKELASQISVLNLQRLYQ 331 (515)
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH--HHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 9998227999999999999827489999999999999999998605403210101--46699999998558899999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 9999999830278889999999999953304
Q 537021.9.peg.4 320 MILKGISEIEGFSRPMEAVEMVLIRLAHAVQ 350 (369)
Q Consensus 320 ~l~~a~~~Lk~n~np~L~lE~lLlkL~~~~~ 350 (369)
T Consensus 332 ~~~~~~~e~~~s~~~~~~~E~~lirl~~~~~ 362 (515)
T COG2812 332 LLLPGLKELKRSLSPRLGLEMTLIRLLEAAP 362 (515)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999861386625799999999875035