HHsearch alignment for GI: peg_472 and conserved domain: KOG0477

Probab=95.55  E-value=0.036  Score=36.15  Aligned_cols=128  Identities=16%  Similarity=0.241  Sum_probs=67.1

Q ss_pred             CCCHHHHHHHHHHHHHCC---------CC---CEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             928489999999999828---------76---706201078798888999999999614687778866587899977999
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKSG---------RI---AQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQA   68 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~~---------~~---~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~   68 (369)
T Consensus       451 IyGh~~VK~AvAlaLfGGv~kn~~~khkvRGDin-vLL~GDPGTaKSQFLKY~eK~s~----RAV~----tTGqGASavG  521 (854)
T KOG0477         451 IYGHEDVKRAVALALFGGVPKNPGGKHKVRGDIN-VLLLGDPGTAKSQFLKYAEKTSP----RAVF----TTGQGASAVG  521 (854)
T ss_pred             HHCHHHHHHHHHHHHHCCCCCCCCCCCEECCCEE-EEEECCCCCCHHHHHHHHHHCCC----CEEE----ECCCCCCCCC
T ss_conf             3145899999999985687568898744514402-89846998228999999986275----3168----5067754333


Q ss_pred             HHCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             9779--87782224533223345556655544565420465237751156648001678999997212211146650675
Q 537021.9.peg.4   69 IIRG--NHVDVVELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEI  146 (369)
Q Consensus        69 i~~~--~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~  146 (369)
T Consensus       522 LTa~v~KdPvt--------------rEWTLEaG-ALVLADkGvClIDEFDKMndqDRtSIHEAMEQQ---S------ISI  577 (854)
T KOG0477         522 LTAYVRKDPVT--------------REWTLEAG-ALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQ---S------ISI  577 (854)
T ss_pred             EEEEEEECCCC--------------CEEEECCC-EEEECCCCEEEEEHHHHHCCCCCCHHHHHHHHC---C------HHH
T ss_conf             26887517865--------------30365167-289726853774121120401101599998751---2------014


Q ss_pred             CC--CCHHHHHHHHHHH
Q ss_conf             43--3035675433321
Q 537021.9.peg.4  147 RK--IPITVLSRCQRFD  161 (369)
Q Consensus       147 ~~--ll~TI~SRcq~~~  161 (369)
T Consensus       578 SKAGIVtsLqArctvIA  594 (854)
T KOG0477         578 SKAGIVTSLQARCTVIA  594 (854)
T ss_pred             HHHHHHHHHHHHHHHHE
T ss_conf             46668998875544300