HHsearch alignment for GI: peg_472 and conserved domain: KOG0731

Probab=98.34  E-value=1.6e-05  Score=60.92  Aligned_cols=126  Identities=23%  Similarity=0.348  Sum_probs=75.3

Q ss_pred             CCCHHHHHHHHHHHHH-----------CCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9284899999999998-----------28767062010787988889999999996146877788665878999779999
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFK-----------SGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAI   69 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~-----------~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i   69 (369)
T Consensus       313 VAG~deAK~El~E~V~fLKNP~~Y~~lGAKiPkGvLL~GPPGTGKTLLAKAiAGE----A---gVPF~svSG--------  377 (774)
T KOG0731         313 VAGVDEAKEELMEFVKFLKNPEQYQELGAKIPKGVLLVGPPGTGKTLLAKAIAGE----A---GVPFFSVSG--------  377 (774)
T ss_pred             CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCC----C---CCCEEEECH--------
T ss_conf             2670899999999999843989998747767675178789998678999988530----5---896464133--------


Q ss_pred             HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHCCCCCEEEEECHHHCC---------------CCHHHHHHHHHHH-
Q ss_conf             7798778222453322334555665554456-5420465237751156648---------------0016789999972-
Q 537021.9.peg.4   70 IRGNHVDVVELDAASHTSIDDVREIIDQIYY-KPISARFRVYIMDEVQMLS---------------TAAFNGLLKTLEE-  132 (369)
Q Consensus        70 ~~~~~~d~~e~~~~s~~~id~ir~l~~~~~~-~p~~~~~kv~iid~a~~m~---------------~~a~NaLLK~lEE-  132 (369)
T Consensus       378 -----SEFvE~~~--g~~asrvr~lf~~ar~~aP-----~iifideida~~~~r~G~~~~~~~~e~e~tlnQll~emDgf  445 (774)
T KOG0731         378 -----SEFVEMFV--GVGASRVRDLFPLARKNAP-----SIIFIDEIDAVGRKRGGKGTGGGQDEREQTLNQLLVEMDGF  445 (774)
T ss_pred             -----HHHHHHHC--CCCHHHHHHHHHHHHCCCC-----EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             -----78888760--3434888999987432698-----07971454200312556666788807888999887875277


Q ss_pred             -CCCCCCEEEEECCCCCCCHHH
Q ss_conf             -122111466506754330356
Q 537021.9.peg.4  133 -PPPHVKFIFATTEIRKIPITV  153 (369)
Q Consensus       133 -Pp~~~~fil~t~~~~~ll~TI  153 (369)
T Consensus       446 ~~~~~vi~~a~tnr~d~ld~al  467 (774)
T KOG0731         446 ETSKGVIVLAATNRPDILDPAL  467 (774)
T ss_pred             CCCCCEEEEECCCCCCCCCHHH
T ss_conf             6778479981168866428876