HHsearch alignment for GI: peg_472 and conserved domain: KOG1514

Probab=98.34  E-value=1.6e-05  Score=60.90  Aligned_cols=191  Identities=21%  Similarity=0.335  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99999999998287670620107879888899999999961468777886658789997799997798778222453322
Q 537021.9.peg.4    6 PMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAASH   85 (369)
Q Consensus         6 ~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s~   85 (369)
T Consensus       407 ~I~~f~~~~i~~~~~g~~mYIsGvPGtGKT~tV~~Vm~~Lq~~s~~~e~p------------------~f~yveINgm~l  468 (767)
T KOG1514         407 EIEDFLRSFISDQGLGSCMYISGVPGTGKTATVLEVMKELQTSSAQKELP------------------KFDYVEINGLRL  468 (767)
T ss_pred             HHHHHHHHHCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCC------------------CCCEEEECCEEE
T ss_conf             99999997627777740799846999883212999999999877505789------------------860798714461


Q ss_pred             CCHHHHH------------------HHHHHHHHH-HHC-CCCCEEEEECHHHCCCCHHHHHHHHHHHCCC---CCCEEEE
Q ss_conf             3345556------------------655544565-420-4652377511566480016789999972122---1114665
Q 537021.9.peg.4   86 TSIDDVR------------------EIIDQIYYK-PIS-ARFRVYIMDEVQMLSTAAFNGLLKTLEEPPP---HVKFIFA  142 (369)
Q Consensus        86 ~~id~ir------------------~l~~~~~~~-p~~-~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~---~~~fil~  142 (369)
T Consensus       469 ~~~~~~Y~~I~~~lsg~~~~~~~al~~L~-~~f~~~k~~~~~~VvLiDElD~Lvtr~QdVlYn~fdWpt~~~sKLvvi~I  547 (767)
T KOG1514         469 ASPREIYEKIWEALSGERVTWDAALEALN-FRFTVPKPKRSTTVVLIDELDILVTRSQDVLYNIFDWPTLKNSKLVVIAI  547 (767)
T ss_pred             CCHHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf             58899999999975557430778899998-65416787878779996357877352098897774077678986699995


Q ss_pred             ECC---CCCCCH-HHHHHH--HHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHC---CCCCCCHHHHCCCCCCC
Q ss_conf             067---543303-567543--332102454001356787643101345625664456531---67642001100011100
Q 537021.9.peg.4  143 TTE---IRKIPI-TVLSRC--QRFDLHRISIGDLIELFTKILQEESIEFDPEAVAMIARA---SDGSARDGLSLLDQAIA  213 (369)
Q Consensus       143 t~~---~~~ll~-TI~SRc--q~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~---s~GslR~Al~lLeq~i~  213 (369)
T Consensus       548 aNTmdlPEr~l~nrvsSRlg~tRi~F~pYth~qLq~Ii~~RL~~~-~~f~~~aielvarkVAavSGDaRraldic~RA~E  626 (767)
T KOG1514         548 ANTMDLPERLLMNRVSSRLGLTRICFQPYTHEQLQEIISARLKGL-DAFENKAIELVARKVAAVSGDARRALDICRRAAE  626 (767)
T ss_pred             CCCCCCHHHHHCCCHHHHCCCEEEECCCCCHHHHHHHHHHHCCCH-HHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             165647798854311233065055137788999999999860315-4314248999998877504227888899899999


Q ss_pred             HHH
Q ss_conf             000
Q 537021.9.peg.4  214 RCN  216 (369)
Q Consensus       214 ~~~  216 (369)
T Consensus       627 ia~  629 (767)
T KOG1514         627 IAE  629 (767)
T ss_pred             HHH
T ss_conf             754