HHsearch alignment for GI: peg_472 and conserved domain: PHA00350
>PHA00350 putative assembly protein.
Probab=95.85 E-value=0.016 Score=38.65 Aligned_cols=126 Identities=18% Similarity=0.299 Sum_probs=67.5
Q ss_pred EHHCCCCCCCHHHHHHHHH--HHHCCCCCCCCCCCCCCCCC-CHHHHHHHCCCCCC---CCCCCCCCCCCHHHHHHHHHH
Q ss_conf 2010787988889999999--99614687778866587899-97799997798778---222453322334555665554
Q 537021.9.peg.4 24 YMLSGTRGIGKTTTARIIA--RSLNYKTAHIDVPTVEFEGF-GEHCQAIIRGNHVD---VVELDAASHTSIDDVREIIDQ 97 (369)
Q Consensus 24 ~lf~G~~G~GK~~~a~~~A--~~l~c~~~~~~~~~~~~c~~-c~~c~~i~~~~~~d---~~e~~~~s~~~id~ir~l~~~ 97 (369)
T Consensus 4 ~~~~G~pGSyKS~~av~~~ilPALk-~GR~Vi--T-Ni~gl~le~i~k~~~-~~p~~~~liri~~~~~~~~~~~~---~~ 75 (402)
T PHA00350 4 YAIVGRPGSYKSYEAVVYHIIPALK-DGRKVI--T-NIPGLNLDVFEKVFG-EFPDTAELIRIVDRNLEDFESMN---RP 75 (402)
T ss_pred EEEECCCCCCCCEEEEHHHHHHHHH-CCCEEE--E-CCCCCCHHHHHHHCC-CCCCCHHEEEEECCCCCCHHHHH---CC
T ss_conf 9982599997660110867688985-699899--7-789988899998717-88360322787437864222220---20
Q ss_pred HHHHHHCCCCCEEEEECHHHC-CCCHHHHHHHHHH-----------HCC------------CCCCEEEEECCCCCCCHHH
Q ss_conf 456542046523775115664-8001678999997-----------212------------2111466506754330356
Q 537021.9.peg.4 98 IYYKPISARFRVYIMDEVQML-STAAFNGLLKTLE-----------EPP------------PHVKFIFATTEIRKIPITV 153 (369)
Q Consensus 98 ~~~~p~~~~~kv~iid~a~~m-~~~a~NaLLK~lE-----------EPp------------~~~~fil~t~~~~~ll~TI 153 (369)
T Consensus 76 f~W~p~-g--aliviDE~q~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~HRh~~wDI~L~Tp~~~~i~~~i 152 (402)
T PHA00350 76 FSWRPR-G--ALYVIDEAQMIFPKRLGFKMANIFKRPFTDFEPHLPEGPENFLEAFMRHRHYNWDIILLTPNIRKIHSDI 152 (402)
T ss_pred CCCCCC-C--CEEEEECHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
T ss_conf 123677-7--7899963133246543300233212666420002678845699999973215866799678878985999
Q ss_pred HHHHHHH
Q ss_conf 7543332
Q 537021.9.peg.4 154 LSRCQRF 160 (369)
Q Consensus 154 ~SRcq~~ 160 (369)
T Consensus 153 r~~~e~~ 159 (402)
T PHA00350 153 RAMIEMT 159 (402)
T ss_pred HHHHHHH
T ss_conf 9999887