HHsearch alignment for GI: peg_472 and conserved domain: PRK05201

>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.
Probab=98.93  E-value=4.6e-09  Score=86.96  Aligned_cols=90  Identities=22%  Similarity=0.421  Sum_probs=57.3

Q ss_pred             CEEEEECHHHCC------------CCHHHHHHHHHHHCC----------CCCCEEEE----ECCCCCCCHHHHHHHH-HH
Q ss_conf             237751156648------------001678999997212----------21114665----0675433035675433-32
Q 537021.9.peg.4  108 RVYIMDEVQMLS------------TAAFNGLLKTLEEPP----------PHVKFIFA----TTEIRKIPITVLSRCQ-RF  160 (369)
Q Consensus       108 kv~iid~a~~m~------------~~a~NaLLK~lEEPp----------~~~~fil~----t~~~~~ll~TI~SRcq-~~  160 (369)
T Consensus       250 GIVFIDEIDKIa~~~~~~g~DVS~EGVQrdLLpivEGt~V~tK~G~V~TdhILFIasGAFh~sKPSDLIPEl~GRlPv~v  329 (442)
T PRK05201        250 GIVFIDEIDKIAKRGEGSGPDVSREGVQRDLLPLVEGSTVSTKYGMVKTDHILFIASGAFHVAKPSDLIPELQGRFPIRV  329 (442)
T ss_pred             CCEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEEE
T ss_conf             70451146565303578898977330788878875388555677760255034550450014782022498717550588


Q ss_pred             HCCCCCCHHHHHHHHH-----------HHHHCCC--CCCHHHHHHHHHCC
Q ss_conf             1024540013567876-----------4310134--56256644565316
Q 537021.9.peg.4  161 DLHRISIGDLIELFTK-----------ILQEESI--EFDPEAVAMIARAS  197 (369)
Q Consensus       161 ~f~~l~~~~i~~~L~~-----------i~~~E~i--~~d~~~l~~ia~~s  197 (369)
T Consensus       330 ~L~~L~~~dl~~ILtepknsL~kQy~~Lf~~egv~L~Ft~~Al~~IA~~A  379 (442)
T PRK05201        330 ELDALTEEDFVRILTEPKASLIKQYQALLATEGVTLEFTDDAIRRIAEIA  379 (442)
T ss_pred             ECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
T ss_conf             82449999999996786157899999998624967998479999999999