HHsearch alignment for GI: peg_472 and conserved domain: PRK05342

>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=99.11  E-value=5.3e-10  Score=93.89  Aligned_cols=112  Identities=27%  Similarity=0.366  Sum_probs=73.1

Q ss_pred             CCCHHHHHHHHHHHHHC------------CC--C-CEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf             92848999999999982------------87--6-706201078798888999999999614687778866587899977
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKS------------GR--I-AQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEH   65 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~------------~~--~-~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~   65 (369)
T Consensus        74 VIGQ~~AKk~lsVAvyNHykRi~~~~~~~~~vei~KsNILliGPTG~GKTlla~tLAk~l~vPF~iaDAT~lT-------  146 (411)
T PRK05342         74 VIGQERAKKVLSVAVYNHYKRLRQNGSKSDDVELQKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLT-------  146 (411)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECEEC-------
T ss_conf             0284888899999999999998602133566521345389989999778899999999869998998612001-------


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCCEEEEECHHHCCCC--------------HHHHHHHHH
Q ss_conf             9999779877822245332233455-5665554456542046523775115664800--------------167899999
Q 537021.9.peg.4   66 CQAIIRGNHVDVVELDAASHTSIDD-VREIIDQIYYKPISARFRVYIMDEVQMLSTA--------------AFNGLLKTL  130 (369)
Q Consensus        66 c~~i~~~~~~d~~e~~~~s~~~id~-ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~--------------a~NaLLK~l  130 (369)
T Consensus       147 ----EaGYV---------G-eDVE~ii~~Llq~Ad~dve~Ae~GIV~IDEIDKIarks~~~s~trDVSgEGVQqaLLkii  212 (411)
T PRK05342        147 ----EAGYV---------G-EDVENILLKLLQAADYDVEKAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKIL  212 (411)
T ss_pred             ----CCCCC---------C-CCHHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             ----26745---------6-079999999999828889988368288850234542478888877765124899999987


Q ss_pred             HHC
Q ss_conf             721
Q 537021.9.peg.4  131 EEP  133 (369)
Q Consensus       131 EEP  133 (369)
T Consensus       213 EGt  215 (411)
T PRK05342        213 EGT  215 (411)
T ss_pred             CCC
T ss_conf             587