HHsearch alignment for GI: peg_472 and conserved domain: PRK05907

Probab=98.83  E-value=1.3e-06  Score=68.92  Aligned_cols=244  Identities=17%  Similarity=0.207  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCC-CCEEEEECC-----C-CCCCHHHHHHHHHHHCC
Q ss_conf             5665554456542046523775115664800167899999721221-114665067-----5-43303567543332102
Q 537021.9.peg.4   91 VREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPH-VKFIFATTE-----I-RKIPITVLSRCQRFDLH  163 (369)
Q Consensus        91 ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~-~~fil~t~~-----~-~~ll~TI~SRcq~~~f~  163 (369)
T Consensus        54 ~~~l~~wte~~glFaS~evi~I~q~ekls~~~refL~~Yar~P~p~Ltl~lfttk~~~f~sL~kkl~sA---~~lslfge  130 (311)
T PRK05907         54 IQELLSWTETFGLFASKETIGIYQAEKMSSSTQEFLIRYARNPNPHLTLFLFTTKQECFSSLSKKLPSA---LCLSLFGE  130 (311)
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCHH---HHHHHHCC
T ss_conf             999988898622412230100031974135489999998439998579986111589999999865121---21687344


Q ss_pred             CCC--CHHHHHHHHHHHHHCCCCCCHHHHHHHH-HCCCCCCCHHHHCCCCCCCHHHCC--CCHHHHHHCCCCCCHHHHHH
Q ss_conf             454--0013567876431013456256644565-316764200110001110000001--21032200013567777788
Q 537021.9.peg.4  164 RIS--IGDLIELFTKILQEESIEFDPEAVAMIA-RASDGSARDGLSLLDQAIARCNDK--IVTSSVRLMLALADRNRIMD  238 (369)
Q Consensus       164 ~l~--~~~i~~~L~~i~~~E~i~~d~~~l~~ia-~~s~GslR~Al~lLeq~i~~~~~~--i~~e~v~~llg~~~~~~i~~  238 (369)
T Consensus       131 ~~~drekri~~~liqrA~~~g~Scsl~~Aslfvkkfpqt~~~~ll~Ef~KLlC~vG~k~sle~sDIqsfv~kke~~SlWk  210 (311)
T PRK05907        131 WFADRDKRIAQLLIQRAELLGISCSLGLASLFVSKFPQTGLFEILSEFQKLLCQMGKKQSLEASDIQSFVVKKEQASLWK  210 (311)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHH
T ss_conf             65678889999999899985667507899999997666647789999999998846854001887999995562128998


Q ss_pred             HHHHHHCCCHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             887630136334678876543-0476213578777534899999974574122344998899999999862998999999
Q 537021.9.peg.4  239 LFGYLIKGDIINVLQEFSSQY-DSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRF  317 (369)
Q Consensus       239 Ll~ai~~~d~~~al~~l~~l~-~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~  317 (369)
T Consensus       211 LrDAllqRd~~~~~~ll~aLl~d~GedpL~li~flRsQ~lygLrS--i~e~~---------~erk~~~f~AyG~erl~q~  279 (311)
T PRK05907        211 LRDALLRRDPVEGHSLLRSLLSDMGEDPLGIINFLRSQCLYGLRS--IEEQS---------KERKHRIFVAYGKERLLQA  279 (311)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH--HHHHH---------CCCHHHHHHHHCHHHHHHH
T ss_conf             888998138588999999999866998089999999999987678--99861---------5311279998468999999


Q ss_pred             HHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHH
Q ss_conf             999999999830278-8899999999999533
Q 537021.9.peg.4  318 WQMILKGISEIEGFS-RPMEAVEMVLIRLAHA  348 (369)
Q Consensus       318 lq~l~~a~~~Lk~n~-np~L~lE~lLlkL~~~  348 (369)
T Consensus       280 l~llf~aEsliKNn~qD~i~a~EtL~irmt~~  311 (311)
T PRK05907        280 LNLLFYAESLIKNNVQDPILAVETLVIRMTNL  311 (311)
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf             99999999998636877289999999987159