HHsearch alignment for GI: peg_472 and conserved domain: PRK06872
>PRK06872 DNA polymerase III subunits gamma and tau; Provisional.
Probab=100.00 E-value=0 Score=680.21 Aligned_cols=339 Identities=38% Similarity=0.606 Sum_probs=326.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 92848999999999982876706201078798888999999999614687778866587899977999977987782224
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVEL 80 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~ 80 (369)
T Consensus 18 ~vgq~~v~~~l~~a~~~~r~~haylf~g~rg~gktt~ari~ak~lnc~~~~----~~~pcg~c~~c~~i~~g~~~d~~ei 93 (696)
T PRK06872 18 VVGQEHILTALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAKGLNCVHGV----TATPCGECENCKAIEEGNFIDLIEI 93 (696)
T ss_pred HCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 238599999999999719863047511789888889999999986789999----9997888622576744787754675
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 53322334555665554456542046523775115664800167899999721221114665067543303567543332
Q 537021.9.peg.4 81 DAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRF 160 (369)
Q Consensus 81 ~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~ 160 (369)
T Consensus 94 daas~~~v~~~r~l~~~~~~~p~~~~~kvy~idevhmls~~~fnallktleepp~~v~f~latt~~~k~p~tilsrc~~f 173 (696)
T PRK06872 94 DAASRTKVEDTRELLDNVQYKPVVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQF 173 (696)
T ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCHHHHHHHHHE
T ss_conf 05655788999999984545776775479997005443899999998750279754489984386322748898766530
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHH
Q ss_conf 10245400135678764310134562566445653167642001100011100000012103220001356777778888
Q 537021.9.peg.4 161 DLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMDLF 240 (369)
Q Consensus 161 ~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~Ll 240 (369)
T Consensus 174 ~~~~~~~~~i~~~l~~i~~~e~~~~~~~al~~~a~~a~gs~rdalsl~dqai~~~~g~~~~~~v~~mlg~~~~~~~~~l~ 253 (696)
T PRK06872 174 HLKALDQTQIAQHLEFILTQENIPFESPALEKLAKAAQGSIRDSLSLTDQAIAMSNANITLDVVSNMLGLLDDNQPIDIL 253 (696)
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 02689999999999999998499779999999999758956778889999999758961699999985888777999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 76301363346788765430476213578777534899999974574122344998899999999862998999999999
Q 537021.9.peg.4 241 GYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRFWQM 320 (369)
Q Consensus 241 ~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq~ 320 (369)
T Consensus 254 ~a~~~~d~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~q~~~~~~~-------~~~~~~~la~~~~~e~~ql~Yqi 326 (696)
T PRK06872 254 YALQQGNGEKLMKVIQAVAEKGGDWDKLLGEIAEKLHQIAMLQLLPQKSS-------EETQLGFLAKHISPEDVQFFYQV 326 (696)
T ss_pred HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC-------CHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 99995589999999999998688999999999999999999985864578-------54799999985799999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 999999830278889999999999953304
Q 537021.9.peg.4 321 ILKGISEIEGFSRPMEAVEMVLIRLAHAVQ 350 (369)
Q Consensus 321 l~~a~~~Lk~n~np~L~lE~lLlkL~~~~~ 350 (369)
T Consensus 327 ~l~g~~dl~~apd~~~g~eM~lLRmlAFrP 356 (696)
T PRK06872 327 MVSGRKELAFAPNRRIGVEMTLLRALAFHP 356 (696)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 984120045699646749999999983588