HHsearch alignment for GI: peg_472 and conserved domain: PRK06995
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.00 E-value=0.0076 Score=41.14 Aligned_cols=60 Identities=13% Similarity=0.138 Sum_probs=39.2
Q ss_pred CCCCEEEEECHHHCCCCH-HHHHHHHHHH--CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 465237751156648001-6789999972--12211146650675433035675433321024
Q 537021.9.peg.4 105 ARFRVYIMDEVQMLSTAA-FNGLLKTLEE--PPPHVKFIFATTEIRKIPITVLSRCQRFDLHR 164 (369)
Q Consensus 105 ~~~kv~iid~a~~m~~~a-~NaLLK~lEE--Pp~~~~fil~t~~~~~ll~TI~SRcq~~~f~~ 164 (369)
T Consensus 253 ~~~dlILIDTaGrs~rD~~~~e~l~~l~~~~~~~~~~LVLsat~~~~dl~~i~~~f~~~~~~~ 315 (404)
T PRK06995 253 RNKHIVLIDTVGMSQRDRMVSEQIAMLHGAGAPVQRLLLLNATSHGDTLNEVVQAYRGPGLAG 315 (404)
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 899999980999897688899999999735788528999779899999999999844699983