HHsearch alignment for GI: peg_472 and conserved domain: PRK06995

>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.00  E-value=0.0076  Score=41.14  Aligned_cols=60  Identities=13%  Similarity=0.138  Sum_probs=39.2

Q ss_pred             CCCCEEEEECHHHCCCCH-HHHHHHHHHH--CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf             465237751156648001-6789999972--12211146650675433035675433321024
Q 537021.9.peg.4  105 ARFRVYIMDEVQMLSTAA-FNGLLKTLEE--PPPHVKFIFATTEIRKIPITVLSRCQRFDLHR  164 (369)
Q Consensus       105 ~~~kv~iid~a~~m~~~a-~NaLLK~lEE--Pp~~~~fil~t~~~~~ll~TI~SRcq~~~f~~  164 (369)
T Consensus       253 ~~~dlILIDTaGrs~rD~~~~e~l~~l~~~~~~~~~~LVLsat~~~~dl~~i~~~f~~~~~~~  315 (404)
T PRK06995        253 RNKHIVLIDTVGMSQRDRMVSEQIAMLHGAGAPVQRLLLLNATSHGDTLNEVVQAYRGPGLAG  315 (404)
T ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCE
T ss_conf             899999980999897688899999999735788528999779899999999999844699983